Corynebacterium diphtheriae 31A: CD31A_1785
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Entry
CD31A_1785 CDS
T01697
Symbol
rne
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
cdz
Corynebacterium diphtheriae 31A
Pathway
cdz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CD31A_1785 (rne)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdz03019
]
CD31A_1785 (rne)
03009 Ribosome biogenesis [BR:
cdz03009
]
CD31A_1785 (rne)
Enzymes [BR:
cdz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CD31A_1785 (rne)
Messenger RNA biogenesis [BR:
cdz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CD31A_1785 (rne)
Ribosome biogenesis [BR:
cdz03009
]
Prokaryotic type
rRNA processing factors
CD31A_1785 (rne)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
DnaJ_CXXCXGXG
Fy-3
Motif
Other DBs
NCBI-ProteinID:
AEX42452
LinkDB
All DBs
Position
complement(1845746..1848634)
Genome browser
AA seq
962 aa
AA seq
DB search
MAEKSKKTTKNQAVSSPIGQVVAALDRSIIGEKIRVHILAKQLGVASKELIAQLATMGLK
KVAQSTLSNQEANQLLDSFVPAQPEVDEKLRHRVEKNVENEIAQIEAKVNRDLEEAAANN
HGVVDSEEEKLRYRVEKNVDNEVEQIKRQVERELSQRSVEVEDLHEVIELEKEAEPLEDV
EPESAPAPASVSYSVPLFIAPTVVDKELEEVEDDEDGEDDTDDDSTHAKRRRRGRRGAGR
GKGADDSTETVEAEEITEPVGIKGSTRLEAQRRRRAELREESKKKRHIVSEAEFLARRES
VTRTMVVRERDRVDHHGMVTQVGVLEDGMLVEHFVTSEAQASMIGNIYLGRVQNVLPSME
AAFIDIGKGRNGVLYAGEVDWRAAGLGGRGRRIEQALKSGDQVLVQVAKDPIGHKGARLT
TQISFAGRYLVYVPGGRTAGISRKLPAPERKRLKEILKEVVPHDGGAIIRTAAENVSAEA
IGADVNRLHKLWDKIQQRTEEEKASKGAKPVTMYEEPNMLVKVVRDLFDEDFTSLVIDGD
RAWNTVHAYVQSVAPDLLGRLVRFDRSEHEGRDAFEVHRVNEQIKKALSRKVWLPSGGTL
VIDRTEAMTVIDVNTGKFTGAGGNLEETVTKNNLEAAEEIVRQMRLRDLGGMIVVDFIDM
VLPENQDLVLRRLTEALGRDRTRHQVSEVTSLGLVQMTRKRLGTGLLETFATECPHCEGR
GVIIHDDPVEQRDADVAMEKSHRARNERKKNKNHTPSEHPAAVAMHEEKKKVSIEDLVAA
VVIEDDPQPEPEVAPAPADDDVMDIVSAALDRAYEEDPDEPSGSDYLPLEEKPQTYAEAV
EEFERSPRRKRKTRGNSVSDVPPRKADFEKPEPQPEPEVVVEKVSSRGRRRAVRRTVVEA
TPEVVAPTETVESSRGRRRAVRKKMAPQPVQTEAVVEDKHEVSAPSQGGRGRRRASRRAP
RR
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaaaagtccaagaaaacaaccaaaaaccaagctgtatcttcgccgattggccaa
gtggtagctgcattggatcgctcgattattggcgaaaaaatccgtgtgcatattctggcc
aagcagctaggtgttgcatctaaagagctcatcgcgcagttggcaaccatgggactgaaa
aaagtagcgcagtcgacgttgagtaaccaagaggctaatcagctgctcgactcttttgtt
ccagcgcaaccggaagtagatgagaaattgcgccaccgcgtggaaaagaacgtggaaaat
gagattgcgcagatcgaagccaaggtcaaccgcgacttggaagaagcggcggcgaacaat
catggtgtagtggattctgaggaagagaagctgcgctaccgcgtggaaaagaacgtggat
aacgaggtcgagcagattaagcggcaggttgagcgcgaactaagtcagcgttcggtggag
gtagaggaccttcacgaggttatcgagctcgaaaaagaagcggagccgctcgaggacgtt
gagccggaatctgcacctgcgccggcgagcgtgtcctatagcgttccgctgtttatcgcg
cccacggtcgttgataaagagctcgaagaagtagaagacgacgaggatggggaagacgac
actgacgacgactccactcatgctaagcgtcgtcgtcgcggccgtcgtggcgctggtcgt
ggcaagggtgcagatgactcaactgagactgtggaagccgaagaaatcaccgagccagta
ggtattaaaggctcaactcgtttggaagcacagcgtcgtcgccgcgcggagctgcgtgaa
gagtcgaaaaagaagcgccacatcgtttctgaggccgagttcctagcgcgtcgcgaatct
gtcacgcgcacgatggtggtacgtgagcgcgatcgtgtagaccaccatggcatggtgact
caggtgggtgtgctcgaagacggcatgcttgttgagcactttgttaccagtgaggcccaa
gcctcgatgatcggcaacatctatcttggtcgcgtgcaaaacgtcctgcccagcatggaa
gctgccttcatcgacatcggaaagggccgcaacggtgtgctttacgcgggcgaggtggac
tggcgtgccgcaggccttggtgggcgaggccgtcgtatcgagcaagccctgaaatccggt
gaccaagtcctcgtccaggttgctaaagatcctattgggcacaagggtgctcgccttacc
acccagatttctttcgcgggacgctacttggtgtacgtgccaggtggacgcactgcaggg
atttcccgcaagctcccagctcctgagcgtaagcgtttgaaggaaatcctcaaggaggtc
gtgcctcacgacggcggtgccatcatccgaactgccgccgaaaacgtttctgcagaggcg
atcggtgcagacgtcaaccgtttgcacaagctctgggataagatccagcagcgcaccgag
gaagaaaaagcttccaagggtgccaagccggtgaccatgtatgaagagcccaacatgctc
gtcaaagtggtgcgtgatctcttcgatgaggatttcacctccttggttatcgatggtgat
cgtgcatggaacacggttcatgcgtatgtgcagtcggttgccccagacttgttgggccgc
ttggtgcgttttgatcgcagcgagcatgagggacgtgacgccttcgaggtgcaccgcgtc
aacgagcagattaaaaaggcactgtcgcgaaaggtttggctgccatccggtggcaccttg
gtgatcgaccgcaccgaagccatgacggtgatcgacgtgaacacaggcaagttcactggt
gccggcggaaacctcgaagagaccgtgaccaagaacaaccttgaggccgcagaagagatc
gttcgtcagatgcgtctgcgcgacctcggcggcatgatcgtggttgatttcattgacatg
gttttgccggaaaatcaggacttggtgctgcgtcgcctcaccgaagcgctaggacgcgac
cggacgcgccaccaggtatccgaggtgacgtcgttaggcctcgttcagatgacccgcaag
cgcttgggcactgggttgcttgaaacgtttgctaccgaatgcccacactgtgaaggccgc
ggcgtgatcatccacgacgatcccgtcgagcagcgagatgccgatgtggcaatggaaaag
tctcatcgtgctcgcaatgagcgcaagaagaacaagaaccacaccccatccgagcatccg
gcggccgttgccatgcacgaggagaaaaagaaggtcagtatcgaagacctcgtcgccgca
gtggtaattgaggacgatccacagccagagcctgaagtggcaccagctcctgccgacgac
gacgtgatggacatcgttagcgctgcgttggatcgtgcttatgaggaagatcctgacgag
ccctccggatctgactatctgccgctagaagaaaagccgcagacctatgccgaggcagtg
gaagagtttgagcgttctccacgccgtaagcgtaagacccgtggcaattccgtctccgat
gtgccgccgcgcaaggcagattttgaaaagccagaaccgcaaccggaacctgaggttgtc
gtggagaaagtaagctcccgtgggcgtcgtcgagctgtgcgacgcacggtagtggaggct
acccccgaggtggtagcgccaacggaaactgttgaatcctcccgtgggcgtcgtcgcgct
gttcgtaagaaaatggcccctcagccagtgcaaacggaggctgtagtggaagacaaacat
gaggtttctgcaccatctcagggtggtcggggacgccgtcgtgcttcacgacgcgcaccg
cgccgttaa
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