Coxiella endosymbiont of Amblyomma americanum: Z664_03010
Help
Entry
Z664_03010 CDS
T03533
Name
(GenBank) RNAse E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
cea
Coxiella endosymbiont of Amblyomma americanum
Pathway
cea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Z664_03010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cea03019
]
Z664_03010
03009 Ribosome biogenesis [BR:
cea03009
]
Z664_03010
Enzymes [BR:
cea01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
Z664_03010
Messenger RNA biogenesis [BR:
cea03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Z664_03010
Ribosome biogenesis [BR:
cea03009
]
Prokaryotic type
rRNA processing factors
Z664_03010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AJC50666
LinkDB
All DBs
Position
638193..640424
Genome browser
AA seq
743 aa
AA seq
DB search
MLINATQLDEVRVAITADSKLIDLDIEIPGQEQKKSNIYKSVITRIEPSLGAVFVNYGSE
RHGFLPLKEISHEYFLQDSSQEFESIDINRVLKVGQELVVQVGKEERGTKGAALTTFISL
AGSFLVLMPNNPQASGISRRIEGEERDQLREAINQLNLPEGMGLIVRTAGLGRAKEELAW
DLKILLRYWEAIKRAAIAKPGPYLIHQESDVIIRAIRDYLRQDIEEILIDNERSYQNACH
YISQVRPQFIGRLKFYCDQLPLFSRFQIEQQIENAHHREVRLPSGGSLIIDHSEALVAID
INSARSTRGASIEETALLTNLEAAEEITRQLRIRDIGGLIVIDFIDMTPIRNQREVEHYL
RNALKQDRARIQIGRISKFGLLEMSRQRLRSSLNRSTQITCPRCEGEGAIRSIESLGLSI
IHLIQEQASKVKNIHFQVQAPVDLAIYLVNEKRETLSVIEKHYPVKITIIPNQYMETPLY
QMKQIRIDLKNLEHGKGIPSYKLSKIFKAETSKKQEIRPSSEPVIQQFLSTGTPLTASSF
PRKTFSGGLFKRLMAKMFGTEEIIKSPFSRVSSSNPHRLIQSSCRKNERRHHRVRESHTI
KSPSSVNQQETNKRYHIQGSSKNNESDVSSEGRRLYRRASRNGGYRNCYRGGVKVDYSSR
HRVQKSDGAVAATLVSSSMVVDIKQLPKPSSSTSPSPSNLTPYINIKPDYSKEYLKKIDI
NRNCLEKNEKTCTNSTAFESKEK
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgctgattaacgcaactcaacttgatgaggtgcgtgtagcgattactgcagattctaaa
ttgattgatcttgatatcgaaattcccggtcaagagcaaaaaaaatccaatatttataaa
agcgttattactagaattgaaccaagtttaggagcagtatttgttaattatggtagtgaa
agacacggatttttaccattaaaagaaatttctcacgaatattttctccaagattcgtct
caagagtttgagtctattgatattaatcgagtgcttaaagtaggccaagaacttgttgtg
caagttgggaaagaagaacgtggaacaaaaggagctgcattaaccacctttatcagttta
gcaggttcttttttagttttaatgcctaataatccacaagcaagtggcatttcacgtcgc
attgaaggagaagagcgcgaccaactgcgtgaagccattaatcaactcaatcttcctgag
gggatgggtttgattgtgcgcaccgctggtctcgggcgtgcaaaggaagaacttgcatgg
gatttaaagatcttattgcgctattgggaagctattaaacgagcggcaattgctaaacca
ggaccttatcttattcatcaagaaagtgatgttatcattcgtgcaattcgggattatcta
cgtcaagatattgaagaaattcttattgataatgagcggtcttatcaaaatgcctgtcac
tatattagccaggttcgtcctcaatttattgggcgtttaaagttttactgtgatcaatta
cctctttttagtagatttcaaattgaacaacaaattgaaaatgcccatcatcgtgaagtt
cgtctcccttctggaggatctttaattattgatcatagtgaagccctagtagccattgat
attaactcagcacgatctactagaggagcaagcatagaagaaacagcacttttgacaaat
ttggaagccgctgaagaaattactcgtcaactacgtattcgagatatcggaggacttatt
gtcatagattttattgatatgactcctattcgtaatcaacgtgaagttgaacattattta
cgtaacgctttaaaacaagatcgtgctcgtattcagattggtcggatttcaaaatttggt
ttactagagatgtctcgtcagaggttgcgttcttctctaaatagatcaactcaaataact
tgtcctcgttgtgaaggggagggtgctattcgtagtatagaatctcttggactttctatt
attcatttaattcaggaacaagcttctaaagttaaaaatattcattttcaggtacaagca
cctgtggatttggcaatttatctcgttaatgaaaaacgagaaactttaagtgttattgaa
aaacattatcctgtaaaaataactattattcctaatcaatacatggaaacaccactttat
cagatgaagcaaattagaatagatctaaaaaacttagaacatggtaaaggtatacctagt
tataaactttccaaaatttttaaagctgaaacatcaaaaaaacaagaaattagaccatca
tcagaacccgtgattcagcaattcttgtccacaggaactccattgacagcatcgagcttt
cctcgtaagacttttagtggcggtttattcaagcgattgatggcaaaaatgtttggaacc
gaagaaatcataaaatcgcccttttctagggtatcatcatctaatcctcatcgattaatt
caatcatcttgcagaaaaaatgaaaggagacatcatcgtgtaagagaatcacatactatc
aaatctccatcatctgtaaatcagcaagagactaataaacgttatcatattcaaggtagt
agtaaaaacaacgaaagcgatgtgagcagtgaaggaaggcgtttatatcgtagagcgtct
cgaaatggaggctatcgaaattgttatcgaggtggtgtcaaagtagattactcttcaaga
catcgtgttcagaaatcggatggtgcagttgccgctacattagtaagtagcagtatggta
gttgatatcaagcaattacctaaaccatcttcttccacttccccttccccttcaaatctt
acaccttatataaatattaaacccgattattccaaagaatatttgaagaaaattgatatt
aatagaaattgccttgaaaaaaacgagaaaacatgtacgaatagtacggcttttgagagt
aaagaaaaataa
DBGET
integrated database retrieval system
