Cellvibrio sp. PSBB023: B0D95_00075
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Entry
B0D95_00075 CDS
T04725
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
ceb
Cellvibrio sp. PSBB023
Pathway
ceb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ceb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B0D95_00075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ceb03019
]
B0D95_00075
Enzymes [BR:
ceb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B0D95_00075
Messenger RNA biogenesis [BR:
ceb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B0D95_00075
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
RpoY
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
AQT58663
LinkDB
All DBs
Position
14652..16247
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AA seq
531 aa
AA seq
DB search
MNRLIGKLFKKLIGSGADKPEKNEAKPVTDKPTAKKHPRERSGQQQNNRGNRNSRDQRPG
QKNEQQTPAVQRDTSAKPPRHSAAPRPKKAQKVDHGPWDISQFAVEEVEGKSRFHDFDLE
PQIMRAIADLGFKYCSPIQAQSLPHALQGKDVVGKAQTGTGKTAAFLTAIIDDLLKNPIT
EKRYAGEARALVIAPTRELVIQIADDAKNLCKYTDLKIHTLVGGMDYVKQQRHLHEDFVD
ILVATPGRLLDFCGNKDVYLDQLEILVIDEADRMLDMGFIPQVRQIVRQTPKREDRQTLF
FSATFTDEVRILVEQWTYKPVTIDIEPESVANERVDQHVYLVSTEEKYTLLYNLIQQEHA
ESMIVFANRRDECRDLQEKLERHGIKAGLLSGEIAQNKRVSTLDAFKSGEIKVLVATDVA
GRGIHISGISHVVNFTLPEEPEDYVHRIGRTGRAGKNGTSISFACEDDALLLEPIAALLG
KPIKCEQPPEYLMLPPPESLPAPARARTNDRFSNRSVGNRPGGNRSRRPRH
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
gtgaatagattgatcggaaaactttttaaaaaattgataggttcaggtgcggataaacct
gaaaaaaacgaggccaagcccgtcactgataaacccaccgcaaaaaaacatccccgcgaa
cgcagtggtcaacagcaaaataatcgcggcaatcgcaatagccgcgatcagcgccctggc
caaaagaatgagcagcaaaccccggccgtccagcgcgatacctccgctaaacctccgcgt
cattccgccgcgccacgcccgaaaaaagcgcaaaaggtagatcacggcccctgggatatt
tcgcaatttgccgtggaggaagtggaaggcaaaagccgttttcacgactttgatctggaa
ccacagatcatgcgcgccattgccgatttaggttttaaatactgttcgcctattcaggcc
caatccctgccgcacgcgttgcaaggtaaggatgtcgtgggcaaggcccaaaccggtacc
ggtaaaaccgccgcgtttttaaccgccattattgatgacctgctcaaaaatcccatcacc
gaaaaacgctatgccggtgaagcgcgtgccttggtgattgcaccaacacgggaactggtt
attcaaatcgccgacgatgccaaaaacctgtgtaaatacaccgacctgaaaattcacacc
cttgtcggcggtatggactacgttaaacaacagcgtcatttacacgaagattttgtggac
atactggtcgctacacccggtcgtttgctcgatttctgcggcaataaagatgtgtatctg
gatcaactggaaattctggtgatcgatgaagctgaccgtatgctggacatgggttttatt
ccgcaagtgcgccaaattgtgcgtcaaacccccaagcgtgaagaccgtcaaaccctgttt
ttctctgctacctttaccgatgaagtgcgcattttggtagagcagtggacctacaaaccc
gtcaccatcgatatcgagcccgagtcagtggcgaacgagcgagtggatcagcatgtgtat
ctggtctccaccgaagagaagtacacgctgctctacaacctgatccagcaagaacatgcc
gagagtatgatcgtgtttgccaatcgccgcgatgaatgccgcgatttgcaggaaaaactg
gagcgccatggcattaaagcgggtttgctctccggcgaaattgcccagaacaaacgggtt
tcaaccctggacgcgtttaaatccggcgagatcaaagtgctggtggcaaccgatgttgcc
gggcgcggtattcacatcagcggcatcagccacgtggtgaatttcaccctgccggaagag
ccggaggattatgtgcatcgcattggccgcaccggccgcgcgggtaaaaacggcacctct
atcagttttgcctgcgaagatgatgccctgctgctggagccgattgcggccttgttgggc
aagcccatcaagtgtgaacagcccccggaatatttaatgctgccaccgccggaaagcttg
cctgcaccggctcgtgcgcgcaccaatgatcgctttagcaatcgctcagtgggcaaccgc
cccggtggcaatcgcagccgtcgcccgcgtcactga
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