Cellvibrio sp. PSBB023: B0D95_02260
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Entry
B0D95_02260 CDS
T04725
Name
(GenBank) RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
ceb
Cellvibrio sp. PSBB023
Brite
KEGG Orthology (KO) [BR:
ceb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ceb03009
]
B0D95_02260
Enzymes [BR:
ceb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B0D95_02260
Ribosome biogenesis [BR:
ceb03009
]
Prokaryotic type
rRNA helicases
B0D95_02260
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SecA_DEAD
Cas3-like_C_2
UvrD-helicase
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AQT59037
UniProt:
A0A1U9N6B9
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All DBs
Position
495542..496915
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AA seq
457 aa
AA seq
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MTQPGFHDLISDTQLRKAIDVLGYEAPTPVQLAAIPAASAGKNLIVSSKTGSGKTAAFLL
PAIQAMLARPCVNPASTRMLILTPTRELARQIVKNAEQILKFTGFKVGMVCGGEELKYQK
AMLRKNPEIIVGTPGRLAEHISHKSTEFSGLEFLVLDEADRMLDMGLSDDVLKITNTCRT
ERQTLLFSATMEQKGLRHLIKQVILGEAEEIYIDEKPNAINQQMLIADDFKHKEKLLLAL
LQKAEFEKAIIFTNTKARATQLDNFLRYNKFRVGALHGDITQDQRKITLDHFRQGRTSIL
VATDVAARGLDIPGVELVVNIDMAYSGDEYLHRIGRTGRANSEGRAVSMVDAKEWNLTKS
IERYLGVSFEVISIPGLKGHYQGPDKTKSSGKSVGTKKKTTVKDKKADAKPKVKVRERDK
KNIGNRRVPKAVAAAPVMDGFAPPKKKVEKQIEERDE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgactcagcccggtttccacgatctgattagcgatacccagttgcgtaaagccattgac
gtgttggggtacgaagcgcccacgcctgtacaacttgcagccattccagcggcaagtgcg
ggcaagaatctgattgtgagttccaaaaccggcagtggtaaaaccgccgcttttttactg
cctgctattcaggcaatgctggctcgcccctgtgtaaatccagcttctacacgtatgctg
attttgacccctacccgcgagttggcgcggcagatcgtcaagaacgcagaacagattttg
aagttcaccggctttaaggtgggtatggtgtgcggtggtgaggagttgaagtatcaaaaa
gccatgctgcgcaaaaatccggaaattattgtgggtaccccagggcgtttagcggagcac
atctcccataagtcgacggagttttccgggttggagtttttggtgttggatgaggcggat
cgcatgctcgatatgggcttgagcgatgatgtgctgaaaattaccaatacctgtcgcacc
gagcgtcagaccttgttgttctcggcaaccatggaacaaaaagggctgcgccatttgatc
aagcaagtcattctgggtgaggcagaagagatttacatcgacgaaaagcccaatgcaatc
aaccagcaaatgttgattgcggatgatttcaagcataaagaaaagctcttgttagccttg
ttgcaaaaagccgaatttgaaaaggccattatttttaccaacaccaaagcacgcgctacc
cagttggataatttcttgcgctataacaagtttcgcgttggcgcgctgcatggtgatatc
actcaggatcagcgcaagatcacactggatcatttccgccaggggcgcaccagtattttg
gtggccacggatgtggcagcgcgcggtttggatatccccggtgtggagttggttgtcaat
atcgatatggcttattcgggcgatgaatatttgcaccggattggccgcactggtcgcgca
aacagtgagggtagggcggtatccatggtggatgccaaagagtggaatctcaccaaaagt
attgagcgttatttaggtgtgagttttgaggtgatcagcattccgggtttgaaaggccat
taccaggggccagataaaaccaagtcttctggtaagtcggtagggactaaaaagaaaacc
acggtgaaagataaaaaagctgatgcgaagcctaaggtgaaagtgcgtgagcgtgataag
aaaaatattggcaatcgtcgcgtgcctaaagcggtagcagctgcgccggtaatggacggt
tttgcgccaccgaaaaagaaagtcgaaaagcagatcgaagaacgcgatgaataa
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