Cellvibrio sp. PSBB023: B0D95_03710
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Entry
B0D95_03710 CDS
T04725
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ceb
Cellvibrio sp. PSBB023
Pathway
ceb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ceb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B0D95_03710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ceb03400
]
B0D95_03710
DNA repair and recombination proteins [BR:
ceb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B0D95_03710
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B0D95_03710
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
AQT59297
LinkDB
All DBs
Position
834814..836826
Genome browser
AA seq
670 aa
AA seq
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MSKQFVVNSEFAPAGDQPTAITGLVQGIEAGLSHQTLLGVTGSGKTFTIANVIAQVQRPT
LIMAHNKTLAAQLYGEFKEFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSAVNEHIE
QMRLSATKALLERKDAIIIASVSAIYGLGDPDAYMKMLLHVVRGDKIDQRQILRRLAELQ
YTRNDMDFARATYRVRGEVIDIYPADSDIEAVRIELFDDEVEQISIFDPLTGEVLQKVPR
FTIYPKSHYVTPREQILEAIENIKEELRTRLEYLRENNKLVEAQRLEQRTRYDLEMMQEL
GYCNGIENYSRYLSGRNSGEAPPTLFDYLPQDALLVIDESHVTIPQIGAMYKGDRSRKET
LVEYGFRLPSALDNRPMRFDEWEHIAPQMIMVSATPGKYEEEKQGQVVEQVVRPTGLIDP
EIEIRPATTQVDDVLSEIRLRVEKGDRVLITVLTKRMAEDLTEYLAEHGVRIRYLHSDID
TVERVEIIRDLRLGQFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSDRSLIQTIGR
AARNVNGKAILYADRITGSMQRAIEETDRRREKQVAHNLKHGITPKGINKSIADILEGSV
APGAGGRSARNKAMAIAERSGKYTVDVNPKDIWKTIELMEKQMFQAAKDLEFEVAAKLRD
EIEKLKHKAV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcaatttgtcgtaaatagtgaattcgcccccgctggggaccagcccactgct
attaccggtttggtgcaaggcatagaggcaggcctgtcccaccagaccctgctcggggtg
accggttccggtaaaaccttcaccatcgccaatgtgattgcgcaggtgcagcgccccacg
ctgattatggcgcacaacaaaaccctggcggcgcagttgtacggggaattcaaagagttc
tttcccaataatgccgtcgaatattttgtttcctactacgactattaccaacccgaagcc
tatgtgccgtcctccgatacctttattgaaaaggattcagcggtaaacgagcatattgag
caaatgcgcttgtcagccaccaaggcgctgctggagcggaaggacgcgattatcatcgcc
tcagtctctgctatttacggtttgggcgacccggacgcctacatgaaaatgttgctgcac
gtcgtacgtggcgacaaaatcgaccagcgccaaattttgcgccgcctcgccgaattgcaa
tacacccgtaacgatatggattttgcgcgtgcgacttatcgtgtgcgtggcgaagtcatt
gatatttatcctgccgattccgatattgaagcggtgcgtattgaattgtttgatgacgaa
gtggagcaaatttctatatttgatccattgactggtgaagtgctgcaaaaagttccgcgc
tttacgatttaccctaaatcccattacgtgactccgcgtgaacaaattctggaagcgatt
gaaaatatcaaagaagaattgcgcacgcgtttggaatatttgcgcgaaaataataaattg
gtagaagcgcagcgcttggaacagcgcacccgctacgatttggaaatgatgcaagagttg
ggatattgcaacggcatcgaaaactattcgcgttatttgtccggccgtaactccggtgaa
gctccacccaccttgtttgattatttgccgcaagacgcgttgcttgttatcgacgaaagc
catgtgaccattccgcaaattggcgccatgtacaaaggcgaccgctcgcgtaaagaaaca
ctggtggaatacggtttccgtttgccctcggcactggataaccgtcccatgcgtttcgat
gagtgggagcacatagccccgcaaatgattatggtgtcggcaacacctggaaaatacgaa
gaggagaagcaagggcaggtcgttgaacaggtggttcgccccactggtttgatcgatccg
gaaattgaaattcgcccggccaccacccaagtggatgatgtgctctctgaaattcgtctg
cgcgtggaaaaaggggatcgtgtattaattacggtactcaccaaacgtatggcagaagat
ttaaccgaatatctcgctgaacacggtgtgcgtattcgctatttgcactcggatattgat
acggtggagcgcgtagaaattattcgcgatttacgtttggggcaattcgatgtgctggtg
ggtattaacctgctgcgtgaaggtttggatatgccggaggtgtcgctggtagcgattctg
gatgcagataaagaaggctttttgcgttcggatcgctcactcatccaaaccattggtcgc
gccgcgcgtaacgtcaatggtaaggcgattctctacgccgaccgcattactggctccatg
caacgcgcgattgaagaaaccgatcgccgccgcgaaaaacaagtggcccacaaccttaaa
cacggcattacccccaaaggaattaacaaaagtattgcagatattctggaaggttcagtc
gcccccggtgctggtggtcgcagcgcgcgcaataaagccatggccattgccgagcgcagt
ggtaaatacacggtagatgtgaatcctaaagatatctggaaaaccatcgagctcatggaa
aaacaaatgttccaggccgcgaaagatttggaatttgaagtggcggctaaactgcgcgat
gagattgaaaaattgaagcacaaggcagtgtaa
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