Cellvibrio sp. PSBB023: B0D95_04460
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Entry
B0D95_04460 CDS
T04725
Name
(GenBank) DNA topoisomerase I subunit omega
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ceb
Cellvibrio sp. PSBB023
Brite
KEGG Orthology (KO) [BR:
ceb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ceb03032
]
B0D95_04460
03400 DNA repair and recombination proteins [BR:
ceb03400
]
B0D95_04460
Enzymes [BR:
ceb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
B0D95_04460
DNA replication proteins [BR:
ceb03032
]
Prokaryotic type
DNA Topoisomerases
B0D95_04460
DNA repair and recombination proteins [BR:
ceb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B0D95_04460
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AQT62264
LinkDB
All DBs
Position
987950..990571
Genome browser
AA seq
873 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNDFIVKSSIGHIRDLPTSGGAKPVDAKERAKQAAATRK
MSAEEKASYQAKKSKSQLVNRMGIDPDNNWEATYEILPGKEKVVDELKKLAEKADMVYLA
TDLDREGEAIAWHLREAIGGDESRYRRVVFNEITKTAIQNAFKTPGPIDQNRVDAQQARR
FLDRVVGYMVSPLLWEKVARGLSAGRVQSVAVRLVVEREREIRAFIPEEYWTLFADLQAD
KGQQASFEVKKFGDEAFKPVNENQAMAAVAALQGASYKVLSREDKPTQSKPSAPFITSTL
QQAASTRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSKEAVESCRDYILENFGKRYLP
ESPVLYSSKDGAQEAHEAIRPSSVAVMPNQLSGMERDAERLYGLIWQQFVACQMTPAEYT
STSVVVTAGDYELRTRGRVIRFDGYTKVSPQVAKKDEDVVLPDMKVGQVLPLIKLNPQQH
FTKPAARYTEASLVKELEKRAIGRPSTYASIISTIQERGYVRQENRRFYAEKMGDIVTER
LVESFDDLMDYGFTANMEDSLDVVAQGGKNWRQLLNEFYAGFSKKLALASSADKGMRAND
PTETDIPCSLCGRHMQIRTGSTGVFLGCSGYALPPKERCKNTMNLVSGDEVIDADADEEA
ESRQLRAKHRCKLCNSAMDSYLLDEHRKLHICGNNPDCAGYEVEQGSYRLKGYEGPTLEC
DKCGSEMQLKTGRFGKYFGCTNAECKNTRKLLKSGEAAPPKVDPIVMPELRCEKVDDHYV
LRDGAAGLFLAASQFPKNRETRAPLVEELLPYKDRIDPKYHFLLSAPVTDPDGNKAIIRF
SRKTKEQYVQTEVNGKATGWKAFFANGKWQVQK
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatccttagttatcgttgagtcgccagcaaaggcgaaaaccattaataagtat
ctgggtaatgactttattgttaagtccagtattggtcatattcgcgatttgcccaccagt
ggtggagccaagcccgtggatgccaaagagcgcgccaagcaggcagccgctacacgcaaa
atgtcagctgaagaaaaggcgagctatcaggccaagaaaagcaaaagccagttggttaat
cggatgggcatagacccggataacaactgggaggccacctacgaaatccttcccggtaaa
gaaaaggttgtcgatgaactgaaaaagctcgcggaaaaggccgatatggtttatctcgca
accgacttggatagagagggagaagcaatcgcttggcatctgcgcgaggcaatcggcggt
gatgaatcacgctatcgccgtgtggtgtttaacgagattaccaagacggcgattcaaaat
gccttcaaaacccccggccccatagatcaaaaccgcgtagacgcccagcaggcacgtcgt
tttctcgatcgtgtagtaggttatatggtctctccgctattgtgggagaaggttgcgcgc
ggtctgtcggccggtcgtgtgcagtcggtcgctgtgcgtttggttgttgagcgcgagcgt
gaaattcgcgcttttatccccgaagaatattggacgttgtttgctgatttgcaggcagac
aaaggtcaacaggccagttttgaagtaaagaaatttggcgatgaggcattcaagcccgtc
aatgaaaatcaggccatggcggcagtagctgctttgcaaggcgccagttataaggttctc
agtcgcgaagacaagccgacacaatccaagccctccgctccgtttatcacttctacactc
cagcaagcggccagtacccgtttgggttttggggtgaaaaaaaccatgatgatggcccag
cgtttgtacgaggcgggctacatcacctacatgcgtaccgattccaccaacctcagtaaa
gaagcggttgaatcctgtcgcgactatattcttgaaaattttggcaagcgctatttgcct
gagtcgcccgtgttgtactcaagcaaagatggcgcccaggaagcgcatgaggcaattcgt
ccatccagcgttgcagtaatgcctaatcaattgagtggtatggagcgcgatgccgagcgc
ttgtacggtttgatttggcaacaatttgtcgcctgtcagatgacgccggcggaatacacc
agcaccagcgttgttgtcactgccggtgattatgagttgcgtacccgcggccgcgttatt
cgcttcgatggttacaccaaagttagtcctcaggtggctaagaaagacgaagatgttgtt
ttgcctgatatgaaagtagggcaagtattgcccctgattaaactcaatccgcaacagcac
ttcaccaagcctgctgcacgttataccgaagccagtttggtgaaagagctggaaaagcgc
gcaattggtcgtccatcaacctatgcatcgattatctcgacgatccaggagcgtggttat
gttcgtcaggagaatcgccggttttacgccgaaaagatgggcgatatagtcaccgaacgt
ctggtggaaagctttgatgacctgatggattatggttttaccgccaatatggaggattcg
ctcgacgtagtggcccaaggtggtaaaaattggcgccaactgctcaatgaattttatgca
gggtttagcaagaagctggcgttggcatccagtgcagataaagggatgcgcgctaacgat
ccgactgaaacggatattccatgcagcctttgtggtcgccacatgcaaatccgcaccggc
agtacgggagtatttctgggctgttccggctatgcattaccgcccaaagagcgctgcaaa
aacaccatgaatctggtgtcgggtgacgaagtgatcgatgcggatgcagatgaagaggcc
gagtctcgtcagctgcgcgccaagcatcgctgcaagttatgtaattcggcgatggattcc
tatctgctggatgagcatcgcaagttgcatatttgtggtaacaacccggattgcgccggt
tatgaagtagagcagggcagttatcgtctcaaggggtatgaaggcccgacgcttgagtgc
gataagtgcggcagtgaaatgcagctcaaaaccggccgttttggtaaatattttggctgc
accaatgccgagtgtaaaaacactcgtaagttattgaaaagcggcgaggctgcgccacca
aaagtagatcctatagtgatgccggaactgcgctgcgagaaggtggatgatcactacgtc
ttgcgtgatggtgctgccggtttattcttggccgccagccagttccctaagaatcgcgaa
acccgtgcgcccttggtggaagagctgcttccctataaggatcgtatcgatcccaaatac
catttcctgttgtcggcaccagttaccgatcccgatggcaacaaagccattattcgcttt
agtcgcaaaaccaaagagcaatatgtgcagacggaagtgaatggcaaggcgactggttgg
aaagcattttttgccaatggcaaatggcaggtccagaaatag
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