Cellvibrio sp. PSBB023: B0D95_04975
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Entry
B0D95_04975 CDS
T04725
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ceb
Cellvibrio sp. PSBB023
Brite
KEGG Orthology (KO) [BR:
ceb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ceb03009
]
B0D95_04975 (rimO)
Enzymes [BR:
ceb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
B0D95_04975 (rimO)
Ribosome biogenesis [BR:
ceb03009
]
Prokaryotic type
ribosomal protein modification factors
B0D95_04975 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
Sigma54_CBD
TRAM
DUF5005
YajR_YAM
Amidohydro_2
Motif
Other DBs
NCBI-ProteinID:
AQT59507
UniProt:
A0A1U9N7M4
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All DBs
Position
1100042..1101445
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AA seq
467 aa
AA seq
DB search
MTVNTFDPSQTTTLDTPAKTLASQVQASGNKGNTIGFVSLGCPKNLVDSERILTQLRTEG
YNIVPTYNDADMVIVNTCGFIDSAVQESLGAIGEALAENGKVLVTGCLGAKKDEIIQVHP
NVLGITGAHAYEEVLSQVHEHLPPNPTHNPFTDLVPPQGIKLTPRHYAYLKISEGCNHSC
SFCIIPDMRGKLVSRPIGQVMGEAERLVKAGVKELLVISQDTSAYGVDIKHRTDFWDGRP
LKTDMYQLAAALGELGVWVRLHYVYPYLHVDNVIPLMAQGKVLPYLDIPFQHASPTLLRK
MRRPGQVEQTLERIKSWREQVPNLTIRSTFIVGFPGETEEDFQQLLDFLQEAQLDRVGCF
QYSPVEGAKANDLPDHVPDEIKQERYDRFMQLQQQISTERLKQKVGQVLQVLIDEVDEEG
AIGRSFADAPEIDGCVYLNGEENVKAGDLVNVLIEHSDEYDLWGTKV
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtaaataccttcgacccttcacaaaccaccacattggataccccggccaagaca
ttggccagccaggtacaggctagcggtaacaaggggaataccattggctttgtgtcgctt
ggctgccccaaaaacctggtggactccgagcgtatcctcacccaattgcgtacagagggt
tacaacattgtccccacctataacgacgctgatatggtgatcgttaatacctgtggtttt
atcgatagtgcggtacaagagtcattgggggctattggtgaagccttagcggaaaatggc
aaagtgttggtgactgggtgtttgggggccaagaaagacgaaattatccaggttcacccc
aatgtattgggtataaccggtgcacatgcctacgaagaagtcttgtcgcaagtgcacgag
cacctgccgcccaaccccacacacaacccctttaccgatctggtgccgccacaaggtatc
aaattaaccccgcgccactatgcgtatttgaaaatctctgaaggctgcaatcactcttgc
agtttctgcattattcccgatatgcgcggcaaattggttagtcgcccaatcgggcaggta
atgggcgaagctgagcgactggtcaaagccggtgtgaaagaactgctggtgatttcacag
gacacctcagcctatggtgtggatatcaaacaccgcacggatttctgggatggtcgcccg
ctaaaaaccgatatgtatcaactggccgctgcattgggcgagttaggggtatgggtgcgt
ttgcattacgtctatccctacctgcacgtagacaatgtgatcccactgatggctcagggc
aaggttttgccgtatctggatattccattccagcatgccagcccaacactgctgcgtaaa
atgcgccgcccgggccaggtagagcaaaccttggagcgtattaaaagctggcgcgagcaa
gtgcccaacctgaccattcgctcgacctttattgtgggcttccccggtgaaactgaagag
gatttccagcaattgctcgacttcttgcaagaagcgcagttggatcgcgttggctgtttc
cagtattccccggtcgaaggcgccaaggctaatgacctgccagatcatgttccggatgaa
atcaaacaggagcgctatgatcggtttatgcaactgcaacaacaaatctctaccgagcga
ttaaaacaaaaggtggggcaggtgttgcaagtgcttatcgatgaagttgatgaggaaggc
gcaattggccgcagttttgctgatgcgccagagatcgatggttgtgtatacctgaacggc
gaagaaaatgtaaaagccggtgatctggtcaatgtattgatcgaacattctgatgaatat
gatctgtggggtaccaaggtctaa
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