KEGG   Cellvibrio sp. PSBB023: B0D95_07345
Entry
B0D95_07345       CDS       T04725                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
ceb  Cellvibrio sp. PSBB023
Pathway
ceb02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ceb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    B0D95_07345
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ceb03021]
    B0D95_07345
Transcription machinery [BR:ceb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     B0D95_07345
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 HTH_23 Sigma70_r4 Sigma70_ECF PhyR_sigma-like HTH_11 HTH_38 HTH_31 Rv2175c_wHTH HTH_40 HTH_36 HsdM_C HTH_24 HTH_29
Other DBs
NCBI-ProteinID: AQT59923
LinkDB
Position
1645619..1646143
AA seq 174 aa
MGRFVSGVGSNETQDLGTLFREHQPWLRGWLSKKTGCPQSAADLAQDTYLRLLVSGHLPS
PAQSRCHLTQIAKGLMIDLFRRKRLEQAYLNSLSDLPEPEVPSAEMQVLLIERLIEIDAL
LHKLPHKARTAFLLNRLEGLSYPEIAKRLSVSVSSIEKYIALALISCYRATYEN
NT seq 525 nt   +upstreamnt  +downstreamnt
atggggcgatttgtgagtggagttggttcaaacgagacgcaagaccttggcaccctgttt
cgggagcatcaaccctggctgcgcggttggttgagcaaaaagactggctgcccgcaaagt
gcggccgatcttgcgcaggatacttacctcagactgctggtatccggtcatttgccctca
ccagctcagtcacgctgtcatctcacccaaattgccaaaggcttgatgattgacctcttt
cgccgtaagcgactggaacaggcttatctgaacagcctcagtgatctgccggagccagag
gtgccttcggcagaaatgcaggtgctgctgatcgaacgattgattgaaatcgacgcactg
ctacacaagctcccccataaggcacgtaccgcctttttgctgaataggcttgaaggcctg
agttaccctgagatcgctaagcggttgagtgttagcgtgtcatctatcgaaaagtacatt
gccctggcgctgattagttgttaccgggcaacctatgaaaactga

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