KEGG   Cellvibrio sp. PSBB023: B0D95_09360
Entry
B0D95_09360       CDS       T04725                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
ceb  Cellvibrio sp. PSBB023
Pathway
ceb02020  Two-component system
ceb02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ceb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    B0D95_09360
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    B0D95_09360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ceb03021]
    B0D95_09360
Transcription machinery [BR:ceb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     B0D95_09360
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID Phage_Mu_Gp48 PLK4_bind_CEP152
Other DBs
NCBI-ProteinID: AQT60278
LinkDB
Position
2116523..2118175
AA seq 550 aa
MKQSLQLKLGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALESNPMLEVEESFDSSASST
DYEGSEQDKIDYTRQQEIAAESGTDNSADFSASDNFSSATSDNFNEPGYSETESFGDSEG
FTDGESFGDNDVYGEGESFSADSGDWSDSIPSDLPVDTSWDDVYQTSSTGNSSNYDNEDS
DFESRRAVTDSLYDHLMWQLNLTPMSDRDRVLAMAIIDAVEPSGMLSITLEEIFEGMRGD
FEELELDEVEAVQHRLQQFDPCGVCSQNLSECLLVQLQQFDPKTPFLDSAKLIAKQYLPL
LGSRDYRQLMRRTKLKEAELSQAIALIQSLNPRPGDIIASGDTEYVVPDVFVEKRDGRWI
VELNPEIAPRLRINSNYASMVKRADSSSDNTFLKDNLQEARWFLKSLQSRNETLLKVASC
IVEKQRGFLDYGPEAMKPLVLHDIAEIVEMHESTISRVTTQKYMHTPQGIFELKYFFSSH
VSTDSGGECSSTAIRAIIKKLVSAENPKKPLSDSKITDLLAEQGIQVARRTIAKYRESLN
IPPSNERKTI
NT seq 1653 nt   +upstreamnt  +downstreamnt
atgaaacaatctctccagcttaaactcggccaacagctgacaatgaccccccaattgcaa
caggcaattcgccttctgcaactgtccacactggatctacaacaggagattcaggaagcc
ctcgaatccaacccgatgcttgaagttgaagagagctttgactcatcagccagcagcacc
gattacgaaggcagcgaacaagacaagattgactacacccgccaacaggaaattgccgct
gaatccggcaccgacaatagcgcggactttagcgcaagcgataacttctcctcagcgacc
agcgacaacttcaacgagcccggctatagcgaaaccgaaagctttggtgacagcgaaggc
tttactgatggggaatcctttggcgataacgatgtctatggtgaaggtgagagttttagt
gccgacagcggcgactggagcgattcaatccccagcgacctgcctgtagacaccagttgg
gacgatgtttaccaaacctcatccaccggaaattccagcaattacgacaacgaagacagt
gactttgaaagccgtcgcgcagtaaccgattcactctacgatcacctgatgtggcaactc
aacctgacacccatgtctgatcgcgaccgggttctggctatggcgatcatcgacgcagtt
gagcccagcggcatgctttccatcacccttgaagaaatatttgaaggcatgcgcggtgat
tttgaagagctggagctggatgaagttgaggccgttcaacaccgcttacagcagtttgat
ccctgtggcgtttgcagccagaatctctcggaatgtttattggtgcaactgcagcaattc
gacccgaaaacaccttttttggattcagcaaagctgatcgccaaacagtatttgcccttg
ctgggaagccgcgactaccgtcaattaatgcggcgtaccaaattgaaagaggcggaatta
agtcaggcaatcgctcttattcaaagcctgaacccgcgcccgggcgatattatcgccagt
ggtgataccgaatatgtagtaccggatgtatttgtagaaaaacgcgatggccgctggatt
gttgaactgaacccggagatagcaccacgcctgcggatcaattccaactacgcttccatg
gtgaagcgtgccgattcaagtagcgataacacgtttctcaaagataacctgcaagaagcc
cgctggttcctgaaaagtttgcagagccgcaatgaaaccctactcaaagtagcaagctgt
attgtggaaaaacaacgtggctttcttgattacggccccgaggcgatgaaaccactggtg
ctgcacgatattgcagaaattgtagagatgcacgaatccactatctcgcgcgtgactacc
cagaaatacatgcataccccacagggaatcttcgagctgaagtattttttctccagccac
gtgagtactgacagtggtggcgaatgttcctcaacggcaattcgcgccatcatcaaaaaa
ttggtgagcgccgagaaccccaaaaaaccgttgagtgacagcaagattaccgacctgctc
gccgagcagggaatacaagtagctcgtcggaccattgcgaaatatcgcgaatcgctgaat
attccgccctccaacgagcgtaaaacaatttaa

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