Cellvibrio sp. PSBB023: B0D95_09360
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Entry
B0D95_09360 CDS
T04725
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
ceb
Cellvibrio sp. PSBB023
Pathway
ceb02020
Two-component system
ceb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ceb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B0D95_09360
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
B0D95_09360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ceb03021
]
B0D95_09360
Transcription machinery [BR:
ceb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B0D95_09360
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Phage_Mu_Gp48
PLK4_bind_CEP152
Motif
Other DBs
NCBI-ProteinID:
AQT60278
LinkDB
All DBs
Position
2116523..2118175
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AA seq
550 aa
AA seq
DB search
MKQSLQLKLGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALESNPMLEVEESFDSSASST
DYEGSEQDKIDYTRQQEIAAESGTDNSADFSASDNFSSATSDNFNEPGYSETESFGDSEG
FTDGESFGDNDVYGEGESFSADSGDWSDSIPSDLPVDTSWDDVYQTSSTGNSSNYDNEDS
DFESRRAVTDSLYDHLMWQLNLTPMSDRDRVLAMAIIDAVEPSGMLSITLEEIFEGMRGD
FEELELDEVEAVQHRLQQFDPCGVCSQNLSECLLVQLQQFDPKTPFLDSAKLIAKQYLPL
LGSRDYRQLMRRTKLKEAELSQAIALIQSLNPRPGDIIASGDTEYVVPDVFVEKRDGRWI
VELNPEIAPRLRINSNYASMVKRADSSSDNTFLKDNLQEARWFLKSLQSRNETLLKVASC
IVEKQRGFLDYGPEAMKPLVLHDIAEIVEMHESTISRVTTQKYMHTPQGIFELKYFFSSH
VSTDSGGECSSTAIRAIIKKLVSAENPKKPLSDSKITDLLAEQGIQVARRTIAKYRESLN
IPPSNERKTI
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaatctctccagcttaaactcggccaacagctgacaatgaccccccaattgcaa
caggcaattcgccttctgcaactgtccacactggatctacaacaggagattcaggaagcc
ctcgaatccaacccgatgcttgaagttgaagagagctttgactcatcagccagcagcacc
gattacgaaggcagcgaacaagacaagattgactacacccgccaacaggaaattgccgct
gaatccggcaccgacaatagcgcggactttagcgcaagcgataacttctcctcagcgacc
agcgacaacttcaacgagcccggctatagcgaaaccgaaagctttggtgacagcgaaggc
tttactgatggggaatcctttggcgataacgatgtctatggtgaaggtgagagttttagt
gccgacagcggcgactggagcgattcaatccccagcgacctgcctgtagacaccagttgg
gacgatgtttaccaaacctcatccaccggaaattccagcaattacgacaacgaagacagt
gactttgaaagccgtcgcgcagtaaccgattcactctacgatcacctgatgtggcaactc
aacctgacacccatgtctgatcgcgaccgggttctggctatggcgatcatcgacgcagtt
gagcccagcggcatgctttccatcacccttgaagaaatatttgaaggcatgcgcggtgat
tttgaagagctggagctggatgaagttgaggccgttcaacaccgcttacagcagtttgat
ccctgtggcgtttgcagccagaatctctcggaatgtttattggtgcaactgcagcaattc
gacccgaaaacaccttttttggattcagcaaagctgatcgccaaacagtatttgcccttg
ctgggaagccgcgactaccgtcaattaatgcggcgtaccaaattgaaagaggcggaatta
agtcaggcaatcgctcttattcaaagcctgaacccgcgcccgggcgatattatcgccagt
ggtgataccgaatatgtagtaccggatgtatttgtagaaaaacgcgatggccgctggatt
gttgaactgaacccggagatagcaccacgcctgcggatcaattccaactacgcttccatg
gtgaagcgtgccgattcaagtagcgataacacgtttctcaaagataacctgcaagaagcc
cgctggttcctgaaaagtttgcagagccgcaatgaaaccctactcaaagtagcaagctgt
attgtggaaaaacaacgtggctttcttgattacggccccgaggcgatgaaaccactggtg
ctgcacgatattgcagaaattgtagagatgcacgaatccactatctcgcgcgtgactacc
cagaaatacatgcataccccacagggaatcttcgagctgaagtattttttctccagccac
gtgagtactgacagtggtggcgaatgttcctcaacggcaattcgcgccatcatcaaaaaa
ttggtgagcgccgagaaccccaaaaaaccgttgagtgacagcaagattaccgacctgctc
gccgagcagggaatacaagtagctcgtcggaccattgcgaaatatcgcgaatcgctgaat
attccgccctccaacgagcgtaaaacaatttaa
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