Cellvibrio sp. PSBB023: B0D95_13685
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Entry
B0D95_13685 CDS
T04725
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ceb
Cellvibrio sp. PSBB023
Pathway
ceb03420
Nucleotide excision repair
ceb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ceb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B0D95_13685
03430 Mismatch repair
B0D95_13685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ceb03400
]
B0D95_13685
Enzymes [BR:
ceb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B0D95_13685
DNA repair and recombination proteins [BR:
ceb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B0D95_13685
MMR (mismatch excision repair)
Other MMR factors
B0D95_13685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
T6SS_Tle1-like_cat
DUF2399
Motif
Other DBs
NCBI-ProteinID:
AQT61024
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All DBs
Position
complement(3152010..3154232)
Genome browser
AA seq
740 aa
AA seq
DB search
MDVSLLLDQLNTEQREAVSAPATNQLILAGAGSGKTRVLVHRIAWLIQVEQMSPYSIMAV
TFTNKAAREMRSRLDELFSQNNQYINSRAMWVGTFHGLAHRLLKAHWQDADLPQNFQILD
SDDQLRLIKRIYQALNLDENKWPHKQAQWYINAQKDEGLRSRHIQETADPFVRTMLQIYR
AYEEDCQRGGMVDFAEILLRAHELWLNKPHILEHYRQRFPFILVDEFQDTNSVQYAWLRM
LAGKESRVTAVGDDDQSIYGWRGAKIENIQRFSQDFADTHIYRLEQNYRSTGNILKAANA
VIKHNYGRLGKELWTEGDKGDPISLYAAYNEQDEARFIVERIQDWARKGHAKKTIAILYR
SNAQSRVLEEALLREAIPYRIYGGQRFYDRLEIKNALAYMRLISNRHDDAGFERVINTPT
RGIGGKTVDDIRLFAREQGCSLWAAAEQMLANKVLTARAGNALQSFLSLINKLAQDANDI
DIHGDTPGLDAIAKMVIEDTGLLLFHQNEKGEKGQARGENLQELITACRAFEAEEEDSEL
TPLQQFLDTAALDAGETQADEFEDAVQLMTLHSAKGLEFPLVFLAGVEEGLFPHKMSADD
PDRLEEERRLCYVGITRAMEKLFISYAETRRLYGNETFNAVSRFVKEIPEDCIEEVRLKT
AVTRPVSVKRPLTQPSNRQPMYDTGEDTGFRLGQRVTHPMFGEGVILQFEGSGPNAVIQI
KFAESGIKRLVMQYAKLTGL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttccctcctcctcgatcaactcaacaccgaacagcgcgaagccgtgtcggct
ccggcgaccaaccagctcatcctcgccggtgcgggcagcggtaaaacccgcgtattggtt
caccgcatcgcctggttgattcaggtggagcagatgtcgccctattcgatcatggcggtg
acctttaccaacaaggccgcgcgcgaaatgcgcagccggttggatgaactgttcagccag
aacaatcaatacatcaacagtcgcgccatgtgggtaggtactttccacggcttggcccat
cgcctgctcaaagcccattggcaggacgccgacctgccgcaaaacttccagattctggac
agcgacgaccagttgcgcctgatcaagcgcatttaccaagcgctcaacctcgatgaaaac
aaatggccgcacaaacaggcgcagtggtacatcaacgcgcaaaaagacgaaggcctgcgc
tcccgccacattcaggaaactgccgatccttttgtgcgcactatgctgcagatttatcgc
gcctacgaagaggattgccagcgcggcggcatggtggattttgccgaaatcctgctgcgg
gcccatgaattgtggctcaacaaaccgcacatccttgagcactatcgccagcgctttccg
tttattttggtggacgaattccaggacaccaacagtgtgcaatacgcttggttacggatg
ctggcgggtaaagaatcgcgcgtgaccgcggtgggcgatgacgatcaatccatttacggt
tggcgcggcgccaaaatcgaaaatatccagcgcttttcgcaggattttgccgatacccat
atttatcgcctcgaacaaaattaccgctccaccggcaatattctcaaagccgccaacgcg
gtgatcaaacacaactacgggcgcctcggcaaagaactgtggacggagggcgacaagggc
gatcctatttcactttacgccgcctacaacgagcaggacgaagcgcgttttattgtggag
cgtattcaggattgggcgcgcaaagggcacgcgaaaaaaaccattgcgattttgtatcgc
tccaacgcccagtcgcgggtattggaagaggcgctgctgcgcgaggccattccctatcgc
atctacggcggccagcgcttttatgatcgtctagaaattaaaaatgccctcgcctatatg
cgcctcatcagcaaccgccacgatgacgctggttttgagcgggtaatcaacacgcctacg
cgcggtattggcggtaaaaccgtggacgatattcgcctgttcgcacgcgaacaaggttgc
tcactctgggcagcggcagagcaaatgctcgccaacaaagtgctcacggcgcgcgcaggc
aatgcactgcaatcctttttaagtttgattaacaagctcgcgcaagacgccaatgacatt
gatattcacggcgatacgccgggcctggatgccatcgccaaaatggtgatagaagacacc
ggcttgctgctattccatcaaaatgaaaaaggtgaaaaaggccaggcgcgcggcgaaaac
ctgcaggaattaatcaccgcttgccgcgcttttgaggctgaagaggaagacagcgaactc
accccgctgcaacaatttttggataccgccgcgctggatgccggtgaaacccaggccgat
gaatttgaagatgcagtgcaattaatgacgctgcactcggccaaggggctggaatttcca
ctggtgtttttagccggtgtggaagaggggttgttcccgcataaaatgtcggcggacgac
ccggatcgattggaagaagagcgacgcctgtgttacgtgggcatcactcgtgctatggaa
aagttatttatcagttatgccgaaacccgtcgcttgtacggcaatgaaacctttaacgcg
gtgtcccgttttgtgaaagaaattcctgaagattgtatcgaagaagtgcgtttaaaaacg
gcggtcacccgccctgtgagcgtcaaacgcccacttacccagccgtccaatcgccaaccc
atgtatgacactggcgaagacaccggcttccgtcttggccagcgcgtcactcaccccatg
tttggcgaaggtgttatcttgcaatttgaaggctcgggtcccaacgccgtgattcaaatt
aaatttgcagaatccggcatcaagcgcttggtaatgcagtatgcgaagttgacggggttg
taa
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