Cellvibrio sp. PSBB023: B0D95_18545
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Entry
B0D95_18545 CDS
T04725
Name
(GenBank) Fis family transcriptional regulator
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ceb
Cellvibrio sp. PSBB023
Pathway
ceb03420
Nucleotide excision repair
ceb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ceb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B0D95_18545
03430 Mismatch repair
B0D95_18545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ceb03400
]
B0D95_18545
Enzymes [BR:
ceb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B0D95_18545
DNA repair and recombination proteins [BR:
ceb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B0D95_18545
MMR (mismatch excision repair)
Other MMR factors
B0D95_18545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
C5orf34-like_N
Motif
Other DBs
NCBI-ProteinID:
AQT61878
UniProt:
A0A1U9NEJ7
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All DBs
Position
complement(4290580..4292505)
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AA seq
641 aa
AA seq
DB search
MSENFYLAETKPDNHDNDVDKNIQECLKIGSGKSFITFAGAGSGKTYSLKQALDFLNAKY
SSVLSPQGKKIAVVTFTNNAAEEIKHRIEQRSIFAVSTIHSFCWSAIVGFNEDIRKWYIN
KIPAELAELEDLEKRGRAGKASDARKQAIVRLKDKMEWLAQPRSFIYDPNGANFEKNALS
HTDVLKIFSSFLTAKPLMADVIVNMFPFIFIDESQDTNSDVINAFFGLQDAKSDKVVIGL
FGDTMQRIFGGGEPKLGKTKPIGWVAFDKRMNHRSARRIVGLGNQIRNEDDQRKQFARDG
AADGYVRYFLLPNGISNKEEVETNIRETMMTVTGDTLWMDVHSKETAILLLEHKMAGRRL
GFDALWETLSKSGKIKDQISDGSNSELKFFSDIVFPMAEASRNQRRAELMSIMRECKSPL
LEASVLEANKDDPLALARTAEHAFRDVVLNHTVSFRTVLEVIATHKLLNIPAKLQPFVAA
TEEGDGQLKPVQEKALQVVEEESKEIEDNEITAWAEALETDFFQIRNYKNYIENRSVFRT
HQGVKGNEFERVMVIMDDDEAGGFLFSYEQYFGAKDLSIDSQRKREAGEEVGLDRTRRLF
YVTSTRAKNSLAHVIYTSDVARVKASLVEKKFAREDEIIEF
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaatttttatttagcagaaactaaaccagataatcatgacaatgacgtagat
aaaaatattcaagagtgcttaaaaataggtagtggaaaaagttttattacctttgcggga
gcaggatcaggaaaaacctactcactaaaacaagctcttgatttcctaaatgcaaaatat
tctagtgtattgtctccacaaggaaagaaaattgctgttgtaacttttacaaacaatgca
gctgaagagatcaaacatcggattgaacagcgatcaatttttgcagtatcgacgatacat
agcttttgctggtctgcaattgtaggttttaacgaagatattcgaaaatggtatataaat
aaaatccctgcggagcttgcggagctcgaagacttagaaaagcgtggtcgagctggaaag
gcgtcagatgccagaaagcaagcaatcgttcgtttaaaagataaaatggaatggttggca
cagccgcgctcatttatttacgatccaaacggagccaactttgagaaaaatgcgttgtcg
cacactgatgtattgaaaattttctctagttttttgactgccaagccgttgatggcagat
gttattgtaaacatgtttcctttcatcttcatcgacgaaagccaggatacaaattcagac
gtaataaatgcattctttggattgcaagatgccaaatctgataaggtggttattggctta
tttggagatacgatgcaacgcatttttggtggtggagagccaaagctaggtaaaactaag
ccgatcggttgggtagccttcgacaaaagaatgaatcatcgctcagcgcgacgtattgtt
ggcttaggcaatcaaattcgaaatgaagatgaccaacgtaaacagtttgctcgtgatgga
gccgctgatggttatgttcgatattttttactgcccaatggtatttcaaacaaagaagaa
gtcgaaaccaatattcgtgaaaccatgatgactgttacgggggacactctatggatggac
gtgcattccaaagaaactgcaatcttacttttggagcacaaaatggctggacgacggctt
ggttttgatgctctttgggaaacgctttcaaaatcaggaaaaattaaagatcaaatttct
gatggctcaaatagtgagctgaaatttttctctgacattgtttttcccatggcagaggca
agtcggaatcaaagacgagccgagcttatgtctattatgagagaatgcaagtcaccgctt
ttggaggctagcgtactagaggcaaataaggacgacccacttgctcttgctcgaaccgcc
gagcatgctttcagagacgtggtattaaatcatacggtcagctttcggacagttctagag
gtaattgctacacacaaattactaaatattcctgcgaaattacagccttttgtagcagcg
accgaagagggtgatggccaattgaagccagtccaggaaaaagcgttgcaggtggtagaa
gaggaatcgaaagagatagaagacaatgagattaccgcttgggctgaagcgctggaaact
gatttttttcaaattagaaattataaaaattatatagagaaccgctcggtattccgcacc
catcaaggcgttaaaggtaatgaatttgaacgcgttatggttatcatggatgatgatgag
gcgggaggattcctattttcctatgagcagtattttggcgctaaagatctttccatagac
agccaaagaaagcgcgaagcaggtgaagaagttggtttggatcgcacccgaaggttattc
tatgtgacatcaacgcgagcaaaaaatagcttagcacatgtgatttatacatccgacgtg
gctagggtaaaagcaagtcttgttgagaaaaaatttgcacgtgaagatgagattatcgag
ttttag
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