KEGG   Cellvibrio sp. PSBB023: B0D95_19465
Entry
B0D95_19465       CDS       T04725                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
ceb  Cellvibrio sp. PSBB023
Pathway
ceb02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ceb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    B0D95_19465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ceb03021]
    B0D95_19465
Transcription machinery [BR:ceb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     B0D95_19465
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_11 PhyR_sigma-like HTH_Tnp_4 HTH_31 GerE TnsD HTH_28 Trp_repressor HTH_29 SAP_new25 HTH_17
Other DBs
NCBI-ProteinID: AQT62045
LinkDB
Position
4491590..4492111
AA seq 173 aa
MPPEAVSDQQFDVWYSNHHDWLQGWLRRRLGDHSVAADLAQDTFLRIWVKSQSDTPPEVN
EPRAYLTTIAKRLMINYCERQSLERAFMATLEQLPEPLVPSIEEQAIVLETLHELDVLLS
ELPPNIRSAFLMSQLEGVTYEEIAVRLQVSVRTVTRYMAQGFRQCLRLMLTSD
NT seq 522 nt   +upstreamnt  +downstreamnt
gtgccgcctgaagctgtatccgaccagcaatttgatgtctggtattcaaatcatcatgac
tggctacaagggtggcttcggcgccgattgggcgatcattctgtggccgctgatttggca
caggacacctttctacggatatgggttaaatcccaatccgacacacctcctgaggtcaat
gagccaagagcttatctcaccaccatcgccaagcggttaatgatcaactattgcgagcgc
cagtcgctggagcgcgcgtttatggcgacgcttgagcaattgccagaacccttggttccc
tctattgaagagcaggcgattgttttggaaaccttgcatgaattggatgtgttgctatcc
gagcttccgcctaatattcgctctgcttttttgatgtctcaattggagggcgtaacttat
gaggagattgccgttcgcctgcaagtaagcgtgcgtaccgttacacgttacatggcgcag
gggttccgccaatgtttgcgcttaatgttaaccagtgactga

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