Cardinium endosymbiont of Sogatella furcifera: CE557_367
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Entry
CE557_367 CDS
T05597
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
cec
Cardinium endosymbiont of Sogatella furcifera
Pathway
cec03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CE557_367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cec03400
]
CE557_367
DNA repair and recombination proteins [BR:
cec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CE557_367
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CE557_367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
nSTAND1
AAA_16
AAA_29
DnaJ_CXXCXGXG
Viral_helicase1
AAA_22
RsgA_GTPase
nSTAND3
NACHT
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AXI24191
UniProt:
A0A345PNK7
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All DBs
Position
1:491127..493976
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AA seq
949 aa
AA seq
DB search
MIDKMDRQQANHVLQDRYGFDYVEVLGARTHNLKNIDVVFPRNQLVIITGVSGSGKSSLA
FDTINAEGQRRYRESFSAYARGFLGSLTRPEVDKINGLSPVIAIEQKTTNRNIRSTVGTT
TEIYDFMRLLFARVADAYAHTTGNRMVTQDEEQILAHLLRAFSKQRVTLMAPVIRGRKGH
HEALLKRIMKLGFNKVRVNGTIIELTDSLKLARHKKHDVALIIDHVLIDLKALDRIKNAL
QLALQYGKGTLLVVDPAQKDYYFSTHLMDEETGLAYDAPEPSLFSFNTPYGACPICDGLG
EITHVDIDTVIPDKSISIKNGAILPLGPYKTSLLFKKIEALLRFFQCKITDPVEILPPAV
LNLLLFGNVIPYRSVLIADCVEPFEGIIAVLIKQQEREMAARNGSIEEGFVYTTICPDCQ
GTRLNPIARSFKIQDKSITDLVAMDLDALKQWFATLSTLLTEKQQIIAHEIIKEIAKRLQ
FLIDVGLHYLHLNRSISSLSGGEAQRIRLATQIGTQLLGVLYILDEPSIGLHQRDNSRLI
GALKALRDIGNTILVVEHDKEIMLAADYLIEIGPQAGLYGGEVVAAGPLNAFLAQPSATA
AFLTDKRHERFNRKPGNGKTLTISGCRGNNLKNVTLTLPLGLMICVTGVSGSGKSSLIRK
TLLPILKKHLYNSRIIALPYTEALGLTHINKVIEVSQLPIGRTPRSNPSTYTGMFTDIRS
FFSILPEAKIRGYKPGRFSFNLKEGRCNTCEGAGIQRIEMGFLPEVYVTCDNCKGKRYSR
ETLEIQYKGKSIADVLDMTVSNAIPFFESHPSILAKLRTLEQVGLGYITLGQHATTLSGG
EAQRVKLATELAKKSTGDTLYILDEPSTGLHFQDILALLSVLKKLVDQGNTVLIIEHNMD
IIKVADYVIDIGPDGGREGGYLIAQGTPEAVAKVPESYTGHCLQKELYL
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgatagataaaatggatagacaacaggctaatcacgttttgcaagatcgttatggtttt
gattatgtggaagtgttaggagcaaggacccacaatttaaaaaatattgatgtagttttc
ccacgcaatcaattggttatcattacaggtgtcagtggcagtgggaaatcatctttggct
tttgataccatcaatgcagaggggcaaaggcggtatagagaaagttttagtgcctatgca
cggggatttttaggtagtttaaccagaccggaagtagataaaatcaatggattaagtccg
gttattgccattgagcagaaaacaaccaatcgcaatatacgttctacggtcgggactact
acagaaatctatgattttatgcgtttgctttttgcacgcgtagcagatgcctatgcccac
actacaggtaatagaatggtcacacaggatgaggaacagattcttgcccatctattacgt
gctttctctaagcaaagggttaccctcatggcgcctgttattagaggtagaaaaggccat
catgaagcactactcaaacgtattatgaaactcggtttcaataaggttagagtgaatggc
accattatagaattgaccgatagcttaaagctggcccgccataaaaaacatgatgttgcc
ttgattatagatcatgttttaatagacctaaaagcattggatcgtattaaaaacgcacta
caattggcgctacaatatggaaaagggaccctattagtagtagatcctgcgcaaaaagat
tactatttttccacccatttaatggatgaagagacagggcttgcctatgatgcaccagaa
ccaagccttttttcttttaatacgccttatggcgcttgtcccatctgcgacggattaggt
gaaattacccatgtagacatagatacggttattccagataaaagtataagcattaaaaat
ggggccattttaccattagggccctataagacatcattattgtttaaaaaaatagaagcc
ttattaaggtttttccaatgcaaaataaccgatccagttgaaatactacctccagctgta
ttgaacttgttgttatttggcaatgttataccttatcgttctgtgcttattgccgattgc
gtcgagccctttgagggcattatcgctgtgctcatcaaacaacaagaacgagagatggct
gcacgaaatggtagtatagaagaggggtttgtttacacaactatatgtccagattgccaa
ggtactagattaaacccaatagctaggtcttttaagattcaagacaaaagtattacggat
ttggtcgcaatggacttagatgcactcaaacaatggtttgctaccttatccactttatta
acagaaaaacagcaaatcattgcccatgagattataaaagaaattgccaaaagactacaa
tttttaattgatgttggcttgcattacctacatcttaatagaagtataagtagcttatcc
ggcggggaagcacaacgtattaggctggctacacaaataggtacccagctactgggtgtc
ctttacattcttgatgaaccaagtattggcttgcatcaacgcgataatagccgtttgatt
ggtgccttaaaagcgcttagagatatcggtaatacaatattggtcgtagagcatgataaa
gaaatcatgttggcagcagactatctgattgaaataggaccgcaggctggtctttatggg
ggagaagtagttgcagcaggtcccttaaacgcgtttttggcacaacccagcgctacagct
gcatttttaaccgataaaaggcatgagcggttcaatcgcaaaccaggaaatggtaaaacc
ctaaccattagcggctgtaggggcaataatttaaaaaatgtaaccttaacccttccattg
ggtctaatgatttgtgtaacaggggtatcaggaagtggtaagtcttcgctgattcgtaaa
accctcttgcctattcttaaaaaacacctttataacagccgcatcattgccctaccctat
acagaagcacttggcttaacacacatcaataaggtgatagaggtcagtcaattacctata
ggcagaacccctcgctctaaccctagtacctataccggtatgtttacagatatacgtagc
tttttttcgattttgccagaggctaaaattagaggctataagccaggtcgattctctttt
aatctaaaagaaggccggtgtaatacttgtgagggcgctggtattcaacgcatcgaaatg
ggttttctgccagaggtatatgtaacgtgtgataactgtaaaggcaaacgatatagccgt
gaaacattagagatacaatataaaggcaaatctattgcggatgtcttagatatgaccgta
tccaatgcgattcctttttttgaaagccatccatctatattggctaaactccgtacctta
gaacaagtaggcctagggtacattaccctggggcaacatgccactaccttatcaggtgga
gaagcacagcgggtcaagttggccacagagttggccaaaaagagtacgggagataccctg
tatatcttagatgaacccagtactggcctgcactttcaagatattctagcgctattatct
gtgttaaaaaagttagtcgaccaaggcaatacggtactgattatagagcacaatatggat
attataaaggtagcagactatgtgattgatattggtccagatggtgggcgagaggggggg
tatctaattgcacaaggtactccagaagctgtggccaaggtaccagagagctatacgggc
cattgcttacaaaaagaattatatttgtaa
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