Cardinium endosymbiont of Sogatella furcifera: CE557_556
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Entry
CE557_556 CDS
T05597
Name
(GenBank) Exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cec
Cardinium endosymbiont of Sogatella furcifera
Pathway
cec03030
DNA replication
cec03430
Mismatch repair
cec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CE557_556
03430 Mismatch repair
CE557_556
03440 Homologous recombination
CE557_556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cec03032
]
CE557_556
03400 DNA repair and recombination proteins [BR:
cec03400
]
CE557_556
Enzymes [BR:
cec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CE557_556
DNA replication proteins [BR:
cec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CE557_556
DNA repair and recombination proteins [BR:
cec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CE557_556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AXI24364
LinkDB
All DBs
Position
1:complement(729386..730189)
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AA seq
267 aa
AA seq
DB search
MSLQLTNPLAFLDLETTGTNVVHDRIIEIAMIKLMPGGKRLTFYKRVNPEQAIPIESSLI
HGIYAEDLKDKPTFKQIGKELIAFLKGADLAGFNLLRFDIPILAESFLRAELDFKVENRK
IVDVQKLFHLMEKRTLKAAYLFYCQKELEGAHNAMVDIEATLEILIEQVKRYENQSVVDS
LGNPLGVIKNDIATLHHLTNTHMVDFAGRMVYNEQQIPVFNFGKHKGKAVSEVLKLEPSY
YNWMLQGDFPLDTKRKLTQIKMGMMQA
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgagtttacaactaaccaacccactagcttttttagatttagaaaccacaggtaccaat
gtggtgcatgatcgcatcatagaaattgcaatgattaaacttatgccaggtggtaaacgc
ttaaccttttataaaagagtgaatccagaacaagctattcctattgaatccagcctcatc
catggtatttatgcagaggatctaaaagacaaaccaacctttaagcaaataggtaaagaa
ttaattgccttcttaaagggagctgacttagctggctttaacctgcttcgttttgatata
cccatattggcagaaagttttttgcgtgcagaactagactttaaagtggaaaatcgcaaa
attgtagatgtgcaaaagttgtttcacctaatggaaaaaagaacattaaaagcagcctac
ctattttattgccaaaaggaattagaaggcgcccataacgccatggtagatatagaagcc
actttagaaatattaatagaacaagtaaaacgatatgaaaatcaatctgtagtcgactct
ttaggtaatccattgggtgtcataaaaaatgatatagctaccctacatcatttaaccaat
acccatatggtcgattttgcaggtagaatggtctacaatgagcaacagatacctgtcttt
aactttggcaaacataaaggcaaagctgtatcagaagtgctcaaattagaaccttcttac
tataactggatgcttcaaggtgattttcctttggataccaaacgaaaattaacacaaatt
aaaatgggaatgatgcaagcttag
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