Dickeya fangzhongdai ND14b: LH89_00405
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Entry
LH89_00405 CDS
T03347
Name
(GenBank) cystathionine beta-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced00260
Glycine, serine and threonine metabolism
ced00270
Cysteine and methionine metabolism
ced00450
Selenocompound metabolism
ced00670
One carbon pool by folate
ced01100
Metabolic pathways
ced01110
Biosynthesis of secondary metabolites
ced01230
Biosynthesis of amino acids
Module
ced_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LH89_00405
00270 Cysteine and methionine metabolism
LH89_00405
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LH89_00405
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LH89_00405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ced04147
]
LH89_00405
Enzymes [BR:
ced01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
LH89_00405
Exosome [BR:
ced04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
LH89_00405
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AIR67735
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All DBs
Position
complement(85420..86574)
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AA seq
384 aa
AA seq
DB search
MSHFDTLTVHAGYTPDSTGAVMPAIYATSTFAQPAPGQHTGYEYSRSGNPTRHALEANIA
ALEGGIQGFAFASGLAASATVLELLDQGSHIVAVDDIYGGTWRLLDRVRKRTAGLSVTYV
DPADLTALEQAITPQTRMIWVETPTNPLLKLADLRAIAELAQRRGVISVADNTFASPALQ
RPLDLGFDIVVHSATKYLNGHSDVVAGLAVVGQDKELAAQLAFLQNAVGGVLDPFSSFLT
LRGIRTLALRLARHSDNALTLARWLEQQPQVEQVYYPGLPSHPQHALARRQMSAFGGMIS
VRLRGDADYAGAVIKRTQLFTLAESLGGVESLISQPFNMTHASLPLEQRLRLGITPQLLR
LSVGIENVEDLIADIRQALTGQSA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgagccatttcgataccctgaccgttcacgccggctacacgccggacagcaccggcgcg
gtgatgccggcgatttacgccacctcgaccttcgcccagccggcgcccggccagcacacc
ggctacgagtactcacgcagcggcaacccaacccgccacgcgctggaagccaatatcgcc
gcgctggaaggcggtattcagggctttgccttcgcttccgggctggcggccagcgccacg
gtgctggaactgctcgatcagggcagccacatcgtcgcggtggatgatatttacggcggc
acctggcgattgctggaccgggtacgcaagcgtaccgccggactcagcgtcacctacgtc
gacccggccgacctgaccgcgctggagcaggctatcaccccgcaaacccgcatgatctgg
gtagaaacgcccaccaacccgctgctgaaactggccgacctgcgcgccatcgccgaactg
gcccagcgccgcggcgtgatcagcgtggcggacaacaccttcgcctccccggccttgcag
cgcccgctggatctgggcttcgatatcgtggtgcactcggccaccaagtatctgaacggc
cactcggatgtggtcgccgggctggcggtagtcggacaggacaaagaactggcggcgcaa
ctggcgtttttgcagaatgcggtaggcggggtactcgatccgttcagcagcttcctgacg
ctgcgcggtattcgcacgctggcgctgcgccttgcccgccatagcgacaacgcgctgacg
ctggcgcgctggctggagcagcaaccgcaggtggaacaggtgtactatcccggcctgccg
tctcacccgcagcatgcgctggcgcgtcggcaaatgagcgcgttcggcggcatgataagc
gtcaggctgcgcggcgatgccgactacgccggcgcggtgattaagcgtacccagctgttt
acgctggcggaaagtctgggcggagtagaaagcctgatcagccagcccttcaacatgacc
cacgcctcgctgccgctggaacagcgcctgcgcctcggcatcacgccgcagttgctgcgc
ctgtcggtcggcatcgaaaacgtggaagacctgatcgccgatatccggcaggcgttaacc
ggccagagcgcgtaa
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