KEGG   Dickeya fangzhongdai ND14b: LH89_00405
Entry
LH89_00405        CDS       T03347                                 
Name
(GenBank) cystathionine beta-lyase
  KO
K01758  cystathionine gamma-lyase [EC:4.4.1.1]
Organism
ced  Dickeya fangzhongdai ND14b
Pathway
ced00260  Glycine, serine and threonine metabolism
ced00270  Cysteine and methionine metabolism
ced00450  Selenocompound metabolism
ced00670  One carbon pool by folate
ced01100  Metabolic pathways
ced01110  Biosynthesis of secondary metabolites
ced01230  Biosynthesis of amino acids
Module
ced_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:ced00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    LH89_00405
   00270 Cysteine and methionine metabolism
    LH89_00405
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    LH89_00405
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    LH89_00405
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ced04147]
    LH89_00405
Enzymes [BR:ced01000]
 4. Lyases
  4.4  Carbon-sulfur lyases
   4.4.1  Carbon-sulfur lyases (only sub-subclass identified to date)
    4.4.1.1  cystathionine gamma-lyase
     LH89_00405
Exosome [BR:ced04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   LH89_00405
SSDB
Motif
Pfam: Cys_Met_Meta_PP Aminotran_1_2 Aminotran_5 DegT_DnrJ_EryC1 Beta_elim_lyase
Other DBs
NCBI-ProteinID: AIR67735
LinkDB
Position
complement(85420..86574)
AA seq 384 aa
MSHFDTLTVHAGYTPDSTGAVMPAIYATSTFAQPAPGQHTGYEYSRSGNPTRHALEANIA
ALEGGIQGFAFASGLAASATVLELLDQGSHIVAVDDIYGGTWRLLDRVRKRTAGLSVTYV
DPADLTALEQAITPQTRMIWVETPTNPLLKLADLRAIAELAQRRGVISVADNTFASPALQ
RPLDLGFDIVVHSATKYLNGHSDVVAGLAVVGQDKELAAQLAFLQNAVGGVLDPFSSFLT
LRGIRTLALRLARHSDNALTLARWLEQQPQVEQVYYPGLPSHPQHALARRQMSAFGGMIS
VRLRGDADYAGAVIKRTQLFTLAESLGGVESLISQPFNMTHASLPLEQRLRLGITPQLLR
LSVGIENVEDLIADIRQALTGQSA
NT seq 1155 nt   +upstreamnt  +downstreamnt
atgagccatttcgataccctgaccgttcacgccggctacacgccggacagcaccggcgcg
gtgatgccggcgatttacgccacctcgaccttcgcccagccggcgcccggccagcacacc
ggctacgagtactcacgcagcggcaacccaacccgccacgcgctggaagccaatatcgcc
gcgctggaaggcggtattcagggctttgccttcgcttccgggctggcggccagcgccacg
gtgctggaactgctcgatcagggcagccacatcgtcgcggtggatgatatttacggcggc
acctggcgattgctggaccgggtacgcaagcgtaccgccggactcagcgtcacctacgtc
gacccggccgacctgaccgcgctggagcaggctatcaccccgcaaacccgcatgatctgg
gtagaaacgcccaccaacccgctgctgaaactggccgacctgcgcgccatcgccgaactg
gcccagcgccgcggcgtgatcagcgtggcggacaacaccttcgcctccccggccttgcag
cgcccgctggatctgggcttcgatatcgtggtgcactcggccaccaagtatctgaacggc
cactcggatgtggtcgccgggctggcggtagtcggacaggacaaagaactggcggcgcaa
ctggcgtttttgcagaatgcggtaggcggggtactcgatccgttcagcagcttcctgacg
ctgcgcggtattcgcacgctggcgctgcgccttgcccgccatagcgacaacgcgctgacg
ctggcgcgctggctggagcagcaaccgcaggtggaacaggtgtactatcccggcctgccg
tctcacccgcagcatgcgctggcgcgtcggcaaatgagcgcgttcggcggcatgataagc
gtcaggctgcgcggcgatgccgactacgccggcgcggtgattaagcgtacccagctgttt
acgctggcggaaagtctgggcggagtagaaagcctgatcagccagcccttcaacatgacc
cacgcctcgctgccgctggaacagcgcctgcgcctcggcatcacgccgcagttgctgcgc
ctgtcggtcggcatcgaaaacgtggaagacctgatcgccgatatccggcaggcgttaacc
ggccagagcgcgtaa

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