Dickeya fangzhongdai ND14b: LH89_00715
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Entry
LH89_00715 CDS
T03347
Name
(GenBank) 23S rRNA pseudouridylate synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
ced
Dickeya fangzhongdai ND14b
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ced03009
]
LH89_00715
Enzymes [BR:
ced01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
LH89_00715
Ribosome biogenesis [BR:
ced03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LH89_00715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AIR67792
LinkDB
All DBs
Position
complement(159488..160114)
Genome browser
AA seq
208 aa
AA seq
DB search
MNKFPVKNHRLKRFSSRPAKNESIAVTKTRIVLFNKPFDVLSQFTDEGGRATLKDYVPFR
DVYSAGRLDRDSEGLMILTNDGKLQARLTQPGKKTPKIYYAQVEGVPDEEALHAFRTGLI
LSDGPTLPAGAEQVEEPAWLWPRQPPIRERKNIPVSWLKITLYEGRNRQVRRMTAHIGYP
TLRLIRYSMANQTLDGLHPGEWREIDHV
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaataaattccctgttaaaaatcaccgacttaaacgattcagctctcgaccggcaaaa
aatgaatccattgccgtaacgaaaacgcgcatcgtgttgttcaataagcctttcgatgtg
ctttcccagtttaccgacgagggtggccgcgccacgctgaaggactatgtcccctttcgc
gacgtctattccgccggccgactggaccgggacagtgaaggcttgatgatactgaccaac
gacggcaagctgcaggcgcgtctgacccagcccggcaagaaaacgcccaaaatctattac
gcccaggttgaaggcgttcccgacgaagaggctttgcacgcgtttcgcaccggcctgata
ctgagtgacggcccgaccctgcccgccggtgctgaacaggtggaagaaccagcctggtta
tggccgcgccagccgccgatccgcgaacgtaaaaatattccggttagctggctgaaaatc
acgttgtacgaagggcgtaaccgccaggtaaggcgtatgacggcgcatatcggctaccca
acgctgcgtttgattcgctacagtatggcgaatcagactcttgatggattgcaccccggc
gaatggagggagatcgaccatgtttaa
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