Dickeya fangzhongdai ND14b: LH89_00735
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Entry
LH89_00735 CDS
T03347
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced00040
Pentose and glucuronate interconversions
ced01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
LH89_00735
Enzymes [BR:
ced01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
LH89_00735
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GFIT
Motif
Pfam:
Pectate_lyase22
PD40
Tricorn_N
Motif
Other DBs
NCBI-ProteinID:
AIR67796
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All DBs
Position
166131..167297
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AA seq
388 aa
AA seq
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MAKGKKLSFSFHTYQDSVTGTEVVRLTPPDVICHRNYFYQKCFSNDGSKLLFGGAFDGPW
NYYLLDLKTQQATQLTEGTGDNTFGGFLSPDDDALYYVKNVRNLMRVDLNTLEETNIYQV
PDDWVGYGTWVANSDCTKMVGIEIKKEDWKPLTDWKKFQEFYFTNPCCRLIRIDLKTGEA
TTILQENQWLGHPIYRPGDDNTVAFCHEGPHDLVDARMWFINEDGTNMRKVKEHAPGESC
THEFWVPNGSALAYVSYLKGSTNRFICSVDPVTLENRQLTEMPPCSHLMSNYDGTLMVGD
GCNAPVDVKDDGGYKIENDPFLYVFNMKTGKHFQVAQHNTSWEVLEGDRQVTHPHPSFTP
DDKHILFTSDVDGKPALYLAKVPDSVWQ
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaggtaaaaagctttctttttcgttccatacctaccaggattcagtcaccggc
accgaagtggtgcgtctcactcctcccgatgttatctgccaccgcaactacttctatcag
aagtgtttttccaatgatggcagcaagctgctgtttggtggcgcctttgacgggccatgg
aactactatttgctggatctgaaaacccagcaggcaacgcagttgaccgaaggtaccggc
gacaatacgttcggcggtttcctgtctccagatgatgatgcgctgtattatgtgaagaac
gttcgtaatctgatgcgcgttgacctgaatacactggaagaaaccaatatttatcaggta
ccggacgattgggtcgggtacggcacctgggttgccaactccgattgcaccaagatggtc
ggcatcgagattaagaaagaggattggaaaccgctgaccgactggaagaaattccaggaa
ttctactttaccaacccatgctgccgtttgattcgtatcgatctgaaaaccggcgaagcc
accaccattctgcaggaaaaccaatggctgggtcatcccatttaccgtccgggcgacgat
aatacggtggcattctgccatgaaggcccgcatgacctggttgatgcgcgcatgtggttc
atcaatgaagatggcaccaatatgcgcaaggtgaaagaacatgcgccgggtgaaagttgc
acccacgagttctgggtgccgaatggttctgcgctggcttatgtttcctatctgaaaggc
agcaccaaccgcttcatttgcagtgtcgatccggtaacgctggaaaaccgtcagttgact
gaaatgccgccgtgttctcacttgatgagcaactacgatggtacgctgatggtaggcgat
gggtgtaatgcgccggtggatgtgaaagatgacggtggctacaagattgaaaacgatccg
ttcttgtatgtgttcaatatgaagaccgggaaacatttccaggtcgcgcaacacaacacc
tcgtgggaagtgctggagggcgaccgtcaggtaacgcatccgcacccgtccttcacaccg
gatgacaaacatattctgtttacgtctgatgtcgatggcaagccggcgttatatctggcg
aaagtgccagattccgtctggcaataa
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