Dickeya fangzhongdai ND14b: LH89_00845
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Entry
LH89_00845 CDS
T03347
Name
(GenBank) pectate lyase
KO
K01731
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced00040
Pentose and glucuronate interconversions
ced01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
LH89_00845
Enzymes [BR:
ced01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
LH89_00845
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GFIT
Motif
Pfam:
Pectate_lyase_2
SHLD1_C
Motif
Other DBs
NCBI-ProteinID:
AIR67818
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Position
complement(187967..189598)
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AA seq
543 aa
AA seq
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MSIFTDLNTSRKWQIDQWLSAINSHIEKIQQYGHSAVNPTPLLADGFEIKTQSPVVWQFP
DGHDAPISNFASQQNWLRLLISMSAVTETEKYRQMALSQSEYFLDRFVDENSGLFYWGGH
RFINLDTLAGEGPESKSMVHELKHHLPYYEFLHQVNPEKTRHFIQGFWNAHVEDWSCLDL
GRHGDYAKQRDPDVFLHSRHDVVTPAKWPELPLTKGLTFVNAGTDLIYAAFVYARHTGDA
HAAAWGKHLYRQYVLARNPETGMPVYQFSSPLQRQPVPADDNQTQSWFGDRAQRQFGPEF
GAIAREANVLFRDMRPLLIDSPLAMLDILRHQPDAEIQTWVISGLKNYYQYAYDVDSNSL
RPMWNNGQDMTGYCFKRDGYYGKAGTVLKPFPLEGDYLLPLVRAWRLSDDDDLYTLIVTM
LSRLEKQGIHQSASPFLLLAITELAQAKQSAQWAEYAWQMAEILFKRYFHHGLFVRSEHH
RYVRLDDPFPAILLTLIAACRNKWPEVPAVLTQGGYIHGDYRINGESRVIYDTEFIYPEK
LIH
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagtatttttactgatttgaacaccagcagaaaatggcaaatcgaccaatggctatcg
gcgattaacagccatattgaaaagattcagcaatacggccacagcgctgtcaacccaacg
ccgttattagctgacggatttgagataaaaacacagtctccagttgtctggcagtttccc
gacggccatgatgcaccgatctctaacttcgccagccagcaaaactggttgcggttatta
atttccatgagtgccgtcacagaaacagaaaaatatcgtcagatggcgttatctcagagc
gaatattttctggatcgctttgtcgatgaaaatagcggacttttttattggggcggccac
cgttttattaatctcgatacgctggccggcgaagggccggaatccaaatcgatggtgcat
gaattaaaacaccatctgccctattacgaatttctgcatcaggttaatccggaaaaaacc
cgccatttcattcagggattctggaatgctcacgtagaagactggagttgcctggatctg
ggccgccacggtgattacgccaagcaacgtgatccggacgtgtttcttcattcccgtcat
gatgtggtcaccccagccaaatggccggaattgccgctgactaaaggactgaccttcgtc
aatgccggcaccgacctgatctacgccgccttcgtctatgcgcgccacactggcgacgcg
cacgcggcggcctggggcaagcacctctaccgtcaatatgtgctggcgcgtaacccggaa
accggcatgccggtttaccagtttagctcgcctttacaacgccagccggtgccggcagac
gataaccagacccaatcctggttcggcgaccgcgctcagcggcagttcgggcctgagttt
ggcgccattgcccgtgaagccaacgtgctgttccgcgacatgcgcccattgctgatcgat
agcccgctggccatgctcgatattctgcgtcatcaacccgatgccgaaatccagacatgg
gtgatctccggcctgaaaaactactatcagtacgcttacgacgttgacagcaacagcctg
cgtcctatgtggaacaacggtcaggacatgaccggctactgcttcaaacgcgacggttac
tacggcaaagccggtaccgtgttgaagcccttcccgctggaaggcgactacctgttgccg
ctggtacgcgcctggcgcctgagcgacgatgacgacctgtacacgctgatcgtcaccatg
ctgtcccgactggaaaaacagggcatccatcaatccgcctcgcctttcctgctgctggcg
attaccgagctggcgcaagccaaacaatcggcgcaatgggcggaatatgcctggcaaatg
gcggagattttatttaagcgctatttccatcacggtttgttcgtgcgctctgaacatcat
cgctatgtacgactagatgatcctttcccagccattctgttgacgctgatcgccgcctgc
agaaataaatggccggaagttcctgctgtcctgacacaagggggatacatccatggagat
tatcgaattaatggggaaagccgggttatttacgacacggagtttatttacccagaaaaa
ttaatccactga
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