Dickeya fangzhongdai ND14b: LH89_00960
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Entry
LH89_00960 CDS
T03347
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced00061
Fatty acid biosynthesis
ced00071
Fatty acid degradation
ced01100
Metabolic pathways
ced01212
Fatty acid metabolism
ced02024
Quorum sensing
ced04146
Peroxisome
Module
ced_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LH89_00960
00071 Fatty acid degradation
LH89_00960
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LH89_00960
09145 Cellular community - prokaryotes
02024 Quorum sensing
LH89_00960
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ced01004
]
LH89_00960
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ced04147
]
LH89_00960
Enzymes [BR:
ced01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LH89_00960
Lipid biosynthesis proteins [BR:
ced01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LH89_00960
Exosome [BR:
ced04147
]
Exosomal proteins
Exosomal proteins of breast milk
LH89_00960
Exosomal proteins of breast cancer cells
LH89_00960
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AIR67841
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All DBs
Position
212853..214523
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AA seq
556 aa
AA seq
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MEKIWLARYPADVPAEIDPDRYASLIELFEHAVSRYADQPAFINMGEVMTFRRLEERSRA
FAAYLQHQLKLKKGDRVALMMPNLLQYPIALFGVLRAGLVVVNVNPLYTPRELEHQLKDC
GASAIVIVSNFAHTLEKVVYNTPVKHVILTRMGDQLAPAKGTLVNFVVKYIKRLVPKYHL
PDAISFRQVLQQGKRMPYVKPEVNNQDLAFLQYTGGTTGVAKGAMLTHRNMQANLMQARA
AYGPVLQEGQELVVTALPLYHIFALTVNCLLFVEIGGKNLLITNPRDIPGMIKELTHYPF
TAITGVNTLFNALLNNDAFSRLDFSTLRLSVGGGASVQQVVAERWEKLTGIHLLEGYGLT
ESAPLVAGNPYDLQHYSGSIGLPVPSTDVRIVNDDGQDVAPGEPGELWVRGPQVMSGYWQ
QPAATRDVLKEGWLATGDIVTADEQGFLKIVDRKKDMILVSGFNVYPNEIEEVVARHPKV
SEAAAIGVPSETSGEAVKVFVVCRDPSLTVEELISHCRRNLTGYKVPRLFEFRSELPKSN
VGKILRRELRNEQSAA
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaaatctggttagcacgttatccggcggatgtccccgcggaaattgacccggat
cgctacgcttcgctaatcgagttgtttgaacacgcggtgtcgcgttatgccgaccagccc
gcctttatcaatatgggcgaggtgatgaccttccgtcggctggaggagcgcagccgcgct
tttgccgcttacctgcagcatcagttgaaactgaaaaagggcgatcgcgtcgcgttgatg
atgcctaacctgctgcagtatccgatcgcgctattcggcgtcctgcgggccggtctggtg
gtggtcaacgtcaatccgctgtatacgccgcgcgagctggagcaccagttgaaagactgc
ggcgcctcggccatcgttatcgtctccaattttgcccatacgctggaaaaggtggtgtac
aacaccccggtgaaacatgtgatcctgacccgcatgggtgatcaactggcgccggctaaa
ggcacgctggtcaacttcgtggtcaagtacatcaagcgtttggtgccgaaatatcacctg
ccggacgccatttcgttccgtcaggtgttgcagcagggcaaacgaatgccgtatgtgaag
ccggaggtgaacaatcaggatctggcgttcctgcaatataccggcggcaccaccggcgtc
gccaagggcgcgatgctgactcaccggaatatgcaggccaatctgatgcaggccagagcc
gcttatggcccggtattgcaggaggggcaggaactggtggtgacggcgctgccgctctat
cacatttttgcgctgacggtgaattgcctgctgtttgttgaaatcggcggaaaaaacctg
ctgattaccaacccgcgcgatattcccggcatgatcaaagagcttacgcactatccgttt
accgccattaccggggtgaatacgctgttcaacgccttgctgaataacgacgcgtttagc
cggctggatttctccacgctgcggctgtcggtaggcggcggtgcatcggtgcaacaggtg
gtggccgagcgctgggaaaaactgaccggcattcatctgctggaaggctatggattgacg
gaaagcgcgccgctggtggcgggaaatccgtatgatctgcaacattacagcggcagtatc
ggtttgccggtgccgtccaccgatgtgcgtatcgtcaatgatgacggtcaggatgtggcg
cccggtgagcctggcgaattgtgggtgcgcggcccgcaggtgatgtccggctactggcag
cagcctgccgcgactcgcgacgtgctgaaagagggctggctggcgaccggtgacattgtc
acggcggacgagcaggggtttctaaaaatcgtcgaccgtaaaaaagacatgattctggtg
tccggcttcaatgtttatcccaatgaaatcgaggaagtggtggcgcgccatccgaaggta
tccgaagcggcggcgattggcgtgcccagcgaaacgtcgggcgaggcggtcaaagtcttc
gtggtgtgccgcgatccctcgctgacggtggaggagctgatcagtcactgccgtcgtaac
ctcaccgggtataaggtgccgcggctattcgaattccgcagcgagttaccgaaatccaac
gtgggaaaaattctccggcgtgagctgcgtaatgagcagtcagccgcctga
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