Dickeya fangzhongdai ND14b: LH89_02150
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Entry
LH89_02150 CDS
T03347
Symbol
ruvB
Name
(GenBank) ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LH89_02150 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ced03400
]
LH89_02150 (ruvB)
Enzymes [BR:
ced01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LH89_02150 (ruvB)
DNA repair and recombination proteins [BR:
ced03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LH89_02150 (ruvB)
RecFOR pathway proteins
LH89_02150 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
AAA_3
AAA_16
Mg_chelatase
AAA_14
TIP49
nSTAND3
Rad17
AAA_18
AAA_2
NTPase_1
AAA_17
RNA_helicase
AAA_28
AAA_24
Bac_DnaA
NB-ARC
ABC_tran
TsaE
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AIR68066
LinkDB
All DBs
Position
complement(492139..493143)
Genome browser
AA seq
334 aa
AA seq
DB search
MIEADRLISPGAVADEELQDRAIRPKLLSEYVGQPVVREQMEIFIEAARKRGDALDHLLI
FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAALLTNLEPHDVLFIDEIHRLSP
VVEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGSLTSPLRDRFGIVQR
LEFYQVADLQHIVRRSAQCLGLDMTEEGALEVARRSRGTPRIANRLLRRVRDFSEVKSDG
VISAEVAIQALDMLAVDSEGFDYMDRKLLLAVIDKFMGGPVGLDNLAAAIGEERETIEDV
LEPYLIQQGFLQRTPRGRIATQHAYRHFGLTREE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagccgatcgtctgatttcacccggcgccgttgccgacgaagaactgcaggat
cgcgcgatccggccgaaactgctgtcagagtacgtcgggcagccggtggtccgcgagcag
atggaaatttttatcgaggcggcccgcaagcgcggcgatgcactcgatcatctgctgatt
ttcggcccgccggggctgggtaaaaccacgctggctaatatcgtcgccaacgaaatgggc
gtgaatttgcgcacgacctccggtccggtgctggaaaaagcgggcgatctggcggcgttg
ctcaccaaccttgaaccgcacgacgtgttgttcatcgacgaaattcatcgtctttcgccg
gtggtggaagaagtgctctacccggcgatggaagattatcaactagatatcatgatcggc
gaagggccggcggcgcgttccatcaagctggacttaccgccgtttaccctggtcggggcg
acaacgcgcgccggctcgctgacctcgccgctgcgtgaccgtttcggcatcgtgcagcgg
ctcgaattctaccaggtcgctgatttacaacatatcgtgcggcgcagcgctcagtgtctg
gggctggatatgaccgaggaaggcgcgctggaagtggcccgccgctcgcgcggtacgccg
cgtatcgccaaccggctgttacgccgggtacgagatttttctgaagtgaaatcggacggg
gtcatttcggccgaggtggcaattcaggcactggatatgctggcggttgactccgaaggg
ttcgattacatggaccgcaagttactgctggcggtgatcgacaagtttatgggcggcccg
gtggggctggataacctggcggcggcaatcggtgaagaacgtgaaaccattgaagatgtg
ctggaaccctatctgattcagcaggggtttctgcaacgtaccccgcgaggccgcatcgct
acacagcacgcctatcgccatttcggtctgacccgagaagagtag
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