Dickeya fangzhongdai ND14b: LH89_02740
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Entry
LH89_02740 CDS
T03347
Name
(GenBank) ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
ced
Dickeya fangzhongdai ND14b
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ced03009
]
LH89_02740
Ribosome biogenesis [BR:
ced03009
]
Prokaryotic type
ribosomal protein modification factors
LH89_02740
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
AIR68177
LinkDB
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Position
629079..630842
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AA seq
587 aa
AA seq
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MTQTFIPGKDAALEDSIARFQQQLLNLGFNIEEASWLNPVPNVWSVHIRDRDCALCFTNG
KGATRKAALASALGEYFERLSTNYFFADFYLGQQIAEGDFVHYPDEKWFPLPEDDSLPEG
ILDARLHAFYDPEQQLIASDLVDLQSGNHNRGICALPFTRQSDQQTVYIPMNIVGNLYVS
NGMSAGNTRNEARVQGLSEVFERYVKNRIIAEAISLPAIPTDVLSRYPGVVEAIATLEQE
GFPIFAYDASLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
DVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKTQADYAFADWNFSGTTEQEFATLM
AIFNKEDKEVYIADYEHLSVYACRILVPGMSDIYPAEDLLLANNSMGAHLRETLLSLPDS
QWEKADYLALLQQLDDEGLDDFTRVRELLGIATGKDNGWFTLRIGELKSMLALAGGDLEQ
ALSWTEWSLDFNQSVFAPARSNYYRCLQTLLQLALEPERDPAQYYDAFVRMYGQDAVDAA
SAAIAGEQCFYGLFTVDADLKALPAHQSLLAAYEKLQRAKRQHWQVK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaacgtttatcccaggcaaagacgccgccctggaagattccatcgcccgtttt
caacagcagctcctcaacctggggttcaacatcgaagaagcctcctggctgaatccggtg
cccaacgtctggtcggtacatattcgtgaccgcgactgcgcgctgtgcttcaccaacggc
aagggcgcaacccggaaagccgcactggcttccgcgctgggcgagtacttcgaacgtctg
tccaccaactacttttttgccgatttctatctgggtcagcagatcgccgaaggtgacttc
gtgcattaccctgacgaaaagtggttcccgctgcccgaagacgacagcctgccggaaggc
attctggatgcgcgcctgcacgccttttatgacccggaacaacagttgatcgccagcgac
ctggtggacctgcaatcaggcaaccacaaccgcggcatctgcgccctgccgtttacccgt
cagtccgaccagcagacggtttatatcccgatgaacatcgtcggcaacctgtatgtgtcg
aacggcatgtccgcaggcaatacccgtaatgaagcacgggtgcaggggctgtctgaagta
ttcgagcgttatgtgaagaatcgtattatcgccgaagccatcagcctgccggcgattccg
accgacgtgctgtcgcgttatccgggcgtggtggaagctattgccacgcttgagcaggaa
ggcttcccgattttcgcctacgacgcctctctcggcggtcagtacccggtgatctgcgtg
gtactgttcaacccggccaacggtacctgttttgcctcgtttggcgcgcatccggatttc
ggcgtggcgctggagcgtaccgtcaccgaattgctgcaaggccgggggctgaaagacctg
gacgtgtttacgccgccaacgttcgatgatgaagaagttgcggagcataccaacctggaa
actcactttatcgattccagcggcctgatttcctgggatctgtttaagacccaggcagac
tatgcgttcgccgactggaacttcagcggcaccaccgagcaggaattcgcaacgctgatg
gcgatcttcaataaagaagacaaagaagtgtatatcgccgattacgaacacctgtcggtg
tacgcctgccgcattctggtaccgggcatgtcggacatctatccggcggaagacctgttg
ctggcgaacaacagcatgggcgcgcatctgcgcgaaaccctgctgtccttgccggacagc
caatgggaaaaagcggattatctggctctgttgcagcaactggacgatgaagggctggat
gattttacccgtgtacgcgagctgttagggatagcaaccggcaaagacaacggctggttc
acactgcgcattggcgaactgaaatccatgctggctctggccggcggcgacctggagcag
gcgctgagctggacggaatggtcactggatttcaaccaatccgtctttgccccggcgcgc
agtaattactaccgttgcctgcaaacgctgctgcaactggcgctggagcctgaacgcgac
cccgcccagtattacgatgcgttcgtgcgcatgtacgggcaggacgccgttgacgctgca
agcgccgccattgccggcgaacagtgcttctatggtctgttcaccgtcgatgctgacctg
aaagcgctgccggctcaccagtcgttgctggctgcttacgaaaaattgcagcgcgctaag
cgccagcactggcaggtaaaataa
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