Dickeya fangzhongdai ND14b: LH89_02985
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Entry
LH89_02985 CDS
T03347
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced00550
Peptidoglycan biosynthesis
ced01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LH89_02985
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ced01002
]
LH89_02985
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ced01011
]
LH89_02985
Enzymes [BR:
ced01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LH89_02985
Peptidases and inhibitors [BR:
ced01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
LH89_02985
Peptidoglycan biosynthesis and degradation proteins [BR:
ced01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
LH89_02985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
AIR68225
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Position
complement(687148..688356)
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AA seq
402 aa
AA seq
DB search
MKTMTPLISWGRVVVVAATVLMTVSPVLRAEQTPPSPQIEAKAFILIDYASGRVLAESNA
DVRLDPASLTKIMSSYVIGQAIKVGKITPEDKVTVGKDAWATGNPALRGSSLMFLKPGDQ
IPVSDLNKGMVIQSGNDASIALADYVAGSQDAFVSLMNQYAATLGLANTHFLTVHGLDTP
GQYSTARDMASLTQALIRDVPGEYALHSEKEFTFNNIRQPNRNRLLWNSNLRVDGVKTGY
TGGAGHSLVASAVDGDMRLISVVLGAPSDAVRFRESEKLLTWGFRFFETVTPVRSDTPFT
TSRVWFGTEKQARLSVAQDAALTVPKGQMKNLKASFTLAQPQLQAPLKKGQVVGTIDFQL
DGNSIGQRPLVVMEDIPEAGFFSRLWDRVLMTLSGWFGGLFG
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaatgacacctctcatttcctggggacgcgtagtcgtggtggccgccacggtg
ctgatgacggtttcgccggtacttcgggctgagcagacgccgccttcgccgcaaattgag
gccaaagcctttattctgatcgattacgccagcgggcgggtgctggcagagtcgaatgcc
gatgtcaggctggatcccgccagcctgactaaaatcatgtccagctatgtgattggtcag
gccatcaaggtggggaagatcacgccggaagataaagtcaccgttgggaaagacgcctgg
gctaccggtaatcctgcactgcgtgggtcgtcgctgatgttcctcaagccgggtgaccag
attccggtgtccgatcttaataaaggcatggtgattcagtccggcaacgacgccagtatc
gcgttggcggattatgtcgccggcagccaggatgcattcgtcagcctgatgaaccagtac
gccgccaccctcgggctggcgaatacccattttctcactgttcatggactggatacgcca
gggcagtacagcacggcccgcgacatggcgagcctgactcaggcgttgatccgcgatgtg
ccgggcgaatacgcgctgcacagcgaaaaagaatttacgttcaataatatccgccagcca
aaccgcaaccgcctgctgtggaacagcaatctgcgcgtggatggcgtgaaaaccggctat
accggcggagcgggtcacagtctggtggcgtccgccgtcgatggcgacatgcggctgatt
tcggtcgtgctgggcgcgccgtccgatgcggtgcgcttccgggagagtgaaaaacttctg
acctgggggttccgcttctttgaaaccgtgacgccggtgcgcagcgatacgccatttacc
acgtcgcgggtgtggttcggcaccgaaaaacaggccagactgagcgtcgcgcaggatgcc
gcgctgaccgtgccgaaagggcagatgaaaaacctgaaggccagtttcacgctggcgcag
ccgcagttgcaggcgccgttgaagaaagggcaggtggtcggaaccattgatttccaactg
gatggcaacagtatcggccagcgtccgttggtggtgatggaggacataccggaagccggc
ttcttcagccgtctgtgggatagagtgctgatgacgctgtccggttggtttggcgggtta
ttcggttaa
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