Dickeya fangzhongdai ND14b: LH89_03245
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Entry
LH89_03245 CDS
T03347
Name
(GenBank) 16S rRNA pseudouridylate synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
ced
Dickeya fangzhongdai ND14b
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ced03009
]
LH89_03245
Enzymes [BR:
ced01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
LH89_03245
Ribosome biogenesis [BR:
ced03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LH89_03245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AIR68275
LinkDB
All DBs
Position
complement(748158..748856)
Genome browser
AA seq
232 aa
AA seq
DB search
MRLDKFLSQQLGISRSLIARELRAQRVTVNGEVVKSGAFKLLPDHEVAFDDNVLEQQNGP
RYFMLNKPQGYVCSTDDPDHPTILYFIDEPVAHKLHAAGRLDIDTSGLVLLTDDGQWSHR
ITSPKHHCEKTYLVTLEQPLAPDTAEHFQAGVQLHGEKDLTRPATLEPISEHQVRLTISE
GRYHQVKRMFAAVGNHVVALHRERIGAIALDDALEPGEYRPLTPEEVASIGQ
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgcgattggataaatttctttcccaacagttggggatcagccgttcgctgatagcgcgt
gaactgcgtgcgcagcgtgtaacggtaaatggcgaggtggtgaagagcggcgcgttcaaa
ctgctgccggaccatgaagtggcgtttgacgacaatgtgcttgaacagcagaacgggccg
cgttatttcatgctcaataagccgcaggggtatgtgtgttcaaccgacgaccccgaccat
ccgacgattttatactttatcgatgaaccggtggcgcacaagctgcacgccgccggccgg
ctggatatcgataccagcggtctggtgctgctgaccgacgacggccagtggtcgcatcgg
attacctcgccgaagcaccattgtgaaaaaacctatctggtgacgctggaacagccgctg
gcgccagacaccgcggagcattttcaggccggcgtgcaattacacggcgagaaggacctg
acccgcccggcgacgctggagccgatttctgagcaccaggtgcggttgaccatcagcgaa
ggtcgctaccatcaggtaaaacgcatgtttgccgcggttggcaaccatgtcgtggcattg
catcgtgaacgcatcggcgcgattgcgctggatgacgcgctggagcccggcgaatatcgg
ccgctgacgccggaagaggtggccagcatcgggcaatag
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