Dickeya fangzhongdai ND14b: LH89_03260
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Entry
LH89_03260 CDS
T03347
Name
(GenBank) hypothetical protein
KO
K19789
DNA repair protein RadD
Organism
ced
Dickeya fangzhongdai ND14b
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ced03400
]
LH89_03260
DNA repair and recombination proteins [BR:
ced03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
LH89_03260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
DUF7577
zf-tcix
Zn_ribbon_3
AAA_16
SLFN-g3_helicase
Zn_Ribbon_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIR68278
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Position
749362..751152
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AA seq
596 aa
AA seq
DB search
MSFTLRPYQQEAVDATLAYFRQHTAPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVRE
LVEQNHAKYCALGLQADIFAAGLNQRDSEGKVVFGSVQSVARHPDKFDDAFSLLIVDECH
RISDDENSQYQQIIQHLQQANPQLRLLGLTATPYRLGRGWIYQYHYHGMIRGDGSCLFRD
CIYELPLRYMIRHGFLVPPERLDMPVVQYDFSQLAARSNGLFNNGSFNNGSFSDVELNRE
LKRQQRVTPHIVRQITEYAVNRRGVMIFAATVEHAREVEGLLPAGEAALISGETPAPQRD
ALIAAFKQQQLRYLVNVSVLTTGFDAPHVDVIAILRPTESVSLYQQIVGRGLRLFPGKTD
CLILDYAGNPFDLYTPEVGHSKPHSDSQPVQVFCPQCGFANLFWGKCTDDGTVIEHYGRR
CQGWQADEQGRRQQCDYRFRFKSCPHCGAENDIAARRCQTCEAVLVDPDDMLKAALKLKD
ALVLRCSGMNLQHGADAKGEWLRITYYDEDGADVSERFRLHTAAQRNAFTHVFLRAHQRA
PGVPFHWQRADDVVAQQALLRAPDFVVARLQGKFWQVREKIFDYQGRYRRAHELRG
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttacactgcgcccgtaccagcaagaagcggttgacgctacccttgcctatttc
cgtcagcataccgccccggcggtcatcgttttacccaccggcgccggcaaaagcctggtg
atcgccgagctggcgcggttggcgcgcggtcgggtattggtgctggcgcacgtcagggaa
ctggtggagcagaatcacgccaaatattgcgcgctggggctgcaggcggacattttcgcc
gctgggctcaaccagcgcgacagcgaaggcaaggtggtgtttggcagcgtgcaatcggtg
gcgcgccaccccgacaaatttgatgacgccttttcgctgctgatcgtcgatgaatgtcac
cggattagcgacgatgaaaacagccagtaccagcaaatcatccagcatttgcagcaggcc
aatccccagttgcggttgctgggattgaccgccaccccttatcgcctcggtcgaggctgg
atctatcagtaccactatcacggcatgatccgcggcgacggcagctgcctgttccgcgat
tgcatctacgaactgccgctgcgctacatgatccgacatggttttctggtgccgccggag
cggctggacatgccggtggtgcagtacgatttcagccaactggcggcgcgcagcaacggg
ctgttcaataacggatcgttcaataacggatcgttcagcgatgtggagctgaaccgggaa
ttgaagcgtcagcaacgggtcacgccgcacatcgtccgccagattacggagtacgccgtt
aaccgacggggcgtgatgattttcgccgccacggttgaacacgcgcgggaagtcgaaggg
ctgctgccggccggcgaagcggcgttgatcagcggtgaaacgcccgcaccgcagcgggat
gcgttgatcgccgccttcaagcagcaacagctgcgctatctggtcaacgtgtcggtgctg
actaccggctttgatgcgccgcacgtcgatgtgatcgccattttgcgcccgacggagtcc
gtcagcctctatcagcagatagtcggccgcggtttgcgcctgtttcccggcaaaaccgac
tgcctgattctggactacgccggcaacccattcgacctctacacgcccgaagtcggccac
agcaaaccgcacagcgacagccagccggtgcaggtgttctgcccacagtgcggcttcgcc
aacctgttctggggaaaatgcaccgatgacggcaccgtgattgagcattatggccgccgt
tgtcagggctggcaggcggacgaacaagggcggaggcaacaatgcgattaccgcttccgt
ttcaaaagctgcccgcattgcggtgcggaaaacgatatcgccgcccggcgctgtcagacg
tgcgaagcggtgctggtcgatccggacgacatgctgaaagccgcgctaaaactgaaagac
gcgttggtgctgcgttgcagcggcatgaacctgcaacacggcgccgacgccaaaggcgaa
tggttgcgcatcacctactacgatgaggacggcgccgacgtcagcgaacgtttccggctg
cacaccgccgcccagcgcaacgcctttacgcatgtttttctgcgagcgcaccagcgcgcg
cccggcgttcccttccattggcagcgtgctgacgatgtcgtcgcgcagcaggcgctgctg
cgtgcgccggacttcgtggtggcccgtttgcagggcaaattctggcaggtgcgggaaaaa
atcttcgattatcagggccgttatcgccgcgcccatgagctacgcggctaa
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