Dickeya fangzhongdai ND14b: LH89_04380
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Entry
LH89_04380 CDS
T03347
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
ced
Dickeya fangzhongdai ND14b
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ced02000
]
LH89_04380
Transporters [BR:
ced02000
]
Other transporters
Pores ion channels [TC:
1
]
LH89_04380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AIR68483
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All DBs
Position
complement(991460..993574)
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AA seq
704 aa
AA seq
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MKVRALYALTPLFLFAQANAADNTNKNDNEMVVTASRTDTEKKDSPQVVTIITKEQIEQQ
RQITSDSSQILSNLLPSMAPSRQKMSGSGETFRGRAPLILVDGIPQSNPLRPTGREMHTI
DFAMVDRIEVIHGASASNGIGATGGVINIITRRPEPGSFNQHFSVETTSPTKVSSDAMSY
KTTYGFSGREEYLDYLFSVSYEDQGLFLDGKDRPIGVDNTQGDLMDSRAYDVMAKVGYWL
DNDQRIQFSLNRYQIKGKMNYLGVAGDRNNGIPTTSISGRPVGDAPMNSVWTTSATYDNY
NLAGMKLNSLVYYQNYESLFGADNSASFQDIRIAPLNQLYDQSRVTSSRYGSKVALTKDD
IWDDYLKATVGFDTLFDTGKQDFWLTKRLYAPQMEYTDLSPFMQFDIQPIESLKITTGVR
YEYARLDIDSFRTVAASTARAPNNSVDVQGGRLSFNKTLYNVGAVWTTPYQPLSLFANYS
QGFGIPDVGRTLRGIKTAGQSVSMLPLEPIVTDNVETGIRIQKDPVEFELSYYRSTSKLG
ERVVDVNGTFQSERQKTRIDGIETSLGYKVNDDHRLKLGYSHIQGWYDSDGNGSLDGKLD
GLNIPPDRLTANWSANWTPQWSSFIQANYAFDRIMDNRQQDFNGYLLVDAAVGYKLPKGK
INLAVSNLFDKEYITYYSQSAIVNSLRYFSGRGRTVTLGYSVDF
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttcgggcattatatgcgttgacgccattatttttatttgcacaggctaacgca
gcagacaacacaaacaaaaatgacaacgaaatggtggtgacggcatcccgaacggatacc
gagaaaaaagattcgcctcaggtcgtgacgattattactaaagaacagatcgaacagcag
cgacaaattaccagtgattcttcccagatattaagcaacttattgccgtcgatggcgccg
agccgccagaaaatgagcggcagcggcgagaccttccgcggccgcgccccgttgattctg
gtggatggtattccgcaatccaacccgctgcgccccaccgggcgtgaaatgcacaccatc
gatttcgcgatggtggatcgcatcgaagtgattcacggcgccagcgccagcaatggcatc
ggcgctaccggcggggtgatcaatatcattacccgccgcccggagccaggctcgttcaac
cagcacttcagcgtggaaaccacctcgccgacgaaagtcagctcggacgccatgagctac
aaaaccacctacgggttcagtggccgtgaagagtatctggattacctgttttcagtcagt
tacgaagatcagggactattcctggacggaaaagatcgccctatcggggttgataacacc
cagggcgacctgatggattcgcgcgcctacgatgtgatggcgaaagtgggctactggctg
gataacgaccagcggatacagttcagccttaaccgctatcagatcaaaggcaagatgaac
tatttaggcgtcgccggtgaccgtaataacggcatcccgaccacctcgatatccgggcgt
ccggtcggcgatgcgccgatgaacagcgtctggaccaccagcgccacctacgataactac
aatctggcgggcatgaagctgaactcgctggtgtattaccagaattacgagtcgctgttc
ggcgctgacaattccgcatctttccaggatatccgcattgcgccgctcaatcagctgtac
gatcagtcgcgggtgacctccagccgctacggcagcaaagtggcgttgaccaaagacgat
atctgggacgattacctgaaagcgacggtcgggttcgataccctgttcgataccggcaaa
caggatttctggctgaccaaacgcctgtacgcgccgcagatggaatacaccgatctgtcg
ccgtttatgcagtttgatatccagccgatcgagtcgctgaaaatcaccaccggggtgcgt
tacgagtacgcgcgtctggatatcgacagcttccgcacggtggcggccagcaccgcgcgt
gcgcccaataacagcgtggatgttcagggtgggcgcctgagtttcaacaagacgctgtac
aacgtcggcgcggtatggaccacgccttaccagccgctgagtctgtttgccaactactcg
cagggcttcggtattccggacgtgggccgtacgttgcgcggcattaaaaccgccggtcag
tcggtcagcatgctgccgctggaaccgattgtcaccgacaacgttgaaaccggtattcgc
atccagaaagacccggtggagtttgagctgagctactaccgctcgacatccaagctgggc
gagcgcgtggtggatgtgaacggcaccttccagagcgaacgtcagaaaacccgtatcgat
ggcatcgagacgtcgctgggttacaaggtgaatgacgatcatcgcctgaaactcggttat
tcccatattcagggctggtatgacagcgacggcaacggcagtctggacggcaagctggac
gggctgaatatcccgccggatcgcctgaccgccaactggtccgccaactggacgccgcaa
tggtcatcctttattcaggctaattatgcctttgaccgaattatggataaccgtcagcag
gactttaacggttatctgctggtggacgccgccgtcggttataaattaccgaaaggtaaa
attaatctggcggtctccaatctgttcgacaaggagtacatcacatattactcgcaaagt
gcgattgtgaactccctgcgttatttctccggtcggggaagaaccgtgacattaggatac
agcgttgacttctga
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