Dickeya fangzhongdai ND14b: LH89_04690
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Entry
LH89_04690 CDS
T03347
Name
(GenBank) hypothetical protein
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
ced
Dickeya fangzhongdai ND14b
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ced03000
]
LH89_04690
Transcription factors [BR:
ced03000
]
Prokaryotic type
Helix-turn-helix
Other families
LH89_04690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF_2
GAF_3
GAF
AAA_5
Mg_chelatase
AAA_2
AAA_16
HTH_8
AAA
AAA_19
AAA_7
AAA_3
PhoH
HTH_50
Motif
Other DBs
NCBI-ProteinID:
AIR68543
LinkDB
All DBs
Position
complement(1056191..1058335)
Genome browser
AA seq
714 aa
AA seq
DB search
MSILWQDALLKISQSLLQQRNIPDLLRALDGVSFSVVRFGRVNLILLDPLHNQMNFYRYD
RESGRTQCSEEAVLLANGPGGVVWSTQTPLHCDRTHFLRDFPHLTDQPAYAGLSDYCQLP
LRGTHRGLGGVEFLKTDGSRFTDNELDFFQALAGVVALVVENISEREQVLQEEERLRHER
DHLRILVDVTNTVISKLELKALALEVSREIHRFFGIDFIALVLKEGEGEAQALKYLATIY
PQAGAPKTVQGEVDRAQTLADGVMAQHQPQLVRVAERPQAGEPRPLSQWFDNALSHVCLL
PLAFGNRTLGVLELAHRSALAVSEADLRLLRQIAARIAIALDNALAYEQITRMKDSLVHE
NFYLTEQLTEHIHQRSGDEFGEIIGRSAAIRQVLEQVEMVAASDSTVLILGETGTGKELI
ARAIHSLSQRKAQHMVKMNCAAIPSGLLESDLFGHEKGAFTGATSQRQGRFELADNSTLF
LDEVGDIPLELQPKLLRVLQEREIERLGGSKVIPVDVRLIAATNRDLKQMVADREYRSDL
YYRLNVFPIVIPPLRERPEDIPLLVKFFTRKIARRMNRTIDSIPSDLLRQLSRLPWPGNV
RELENVVERAVILTRGTTLNLQIDELQHHLSPLEVPKPAHRDFTPPPVAAEPSSGQLDAE
EESERERIIRVLRETNGIVAGPKGAAARLGLKRTTLLSRMQRMGISAREIEGIS
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
ctgtctattctgtggcaggatgccttgctgaaaatttctcagtcactgttgcaacagcgc
aacattcccgacctgctgcgggcgctggatggcgtgtcgttttcagtggtgcgctttggc
cgggttaatctgatcctgcttgatccgctgcataaccagatgaatttctaccgctacgat
cgcgaatccgggcgtacccagtgcagcgaagaggcggttctgctggcgaacggtcccggt
ggggtggtgtggagcacccagaccccattgcattgcgatcgcacgcacttcctgcgcgat
tttccccacttgaccgaccagccggcctacgccggactgagcgattattgtcagttgccg
ctacgtggcacgcaccgcgggctgggcggggtggaatttctcaagaccgacggtagccgt
ttcaccgataacgaactcgattttttccaggcgctggccggagtggtggcgctggtggtg
gaaaacattagtgaacgcgagcaggtgttgcaagaagaggagcggttgcgccatgagcgc
gaccatctgcgcattttagtggatgtcaccaataccgtgatttccaaactggagctgaag
gcgctggcgttggaggtgtcgcgcgaaatccaccgctttttcggcatcgattttatcgcg
ctggtattaaaagaaggcgagggcgaagcgcaagcgctcaagtatctcgccaccatctac
ccgcaggctggcgcgccgaaaacggtgcaaggcgaggtggatcgggcgcaaacgctggca
gacggcgtgatggcgcagcatcagccgcagctggtacgggtggcggagcgcccccaggcc
ggcgagccgcgcccgctcagtcagtggtttgacaatgcgttgtctcatgtctgcctgttg
ccgctggcgtttggcaaccggacgttgggggtgctggaactggcgcaccgttcagcgctg
gcggtcagcgaggcggatctccggctgctgcggcaaattgccgcgcgtatcgccattgcg
ctggataacgcgctggcttatgagcagatcacccgcatgaaagattcgttggtgcatgag
aatttctacctgacggaacagcttaccgagcatattcatcagcgcagcggcgacgaattc
ggcgaaatcatcggccgcagcgccgccatccggcaggtgctggaacaggtggagatggtg
gcggccagcgacagcacggtgctgattttgggtgaaaccggcaccggcaaggagctgatt
gcccgcgctatccacagcctgagccagcgtaaagcccagcatatggtgaaaatgaactgc
gccgccattccgtccggcctgctggaaagcgacctgttcggccatgaaaagggtgcgttt
accggcgccaccagtcagcgtcaggggcggtttgaactggcggataacagcacgctgttt
ctggatgaggtgggcgatatcccgctggaattgcagcccaaactgctgcgggtgttgcag
gagcgggagatagaacggctgggcggcagcaaagtcattccggtggacgtgcggttgatt
gccgccaccaaccgcgacctgaaacagatggtggcggatcgtgagtaccgcagcgacctg
tattaccggctcaacgtgtttcccatcgttattccgccgttgcgcgagcggccggaagat
attccgctgctggtgaagtttttcacccgcaagatcgcccgtcgcatgaaccgcactatc
gacagcattccgtccgacctgctgcgtcagctgagccgtttaccgtggccgggcaacgtg
cgggaactggaaaacgtggtggagcgggcggtgatcctgacgcgcggcaccacgcttaat
ttgcagatagatgaattgcagcatcatctgtcgccgctggaagtgcccaaaccggcgcac
cgcgactttacgccgccgccggtggcggccgagccgtcatccgggcagttggatgccgaa
gaggagtcggaacgcgagcggattatccgggtattgcgggaaaccaacggcatcgtcgcc
ggtccgaaaggcgccgccgcccggcttgggcttaaacgcaccacattgttgtcgcggatg
caacgcatggggatttccgcccgggaaatcgaagggatttcctga
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