Dickeya fangzhongdai ND14b: LH89_05180 Help Entry LH89_05180        CDS       T03347                                  Name (GenBank) Clp protease ClpV   KO K11907   type VI secretion system protein VasG Organism ced  Dickeya fangzhongdai ND14b Pathway ced03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:ced00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     LH89_05180  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:ced02044]     LH89_05180 Secretion system [BR:ced02044]  Type VI secretion system   Imp/Vas secretion system core components    LH89_05180 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_2 AAA_lid_9 AAA AAA_5 AAA_16 ClpB_D2-small AAA_22 AAA_7 NACHT TniB AAA_29 RsgA_GTPase Sigma54_activat NBD_SMAX1 Clp_N Rootletin Motif Other DBs NCBI-ProteinID:  AIR68635 LinkDB All DBs Position complement(1205095..1207713) Genome browser AA seq 872 aa AA seqDB search MIRIELPILVERLNPLCRHMMEEAAALCIQHQGAEIRIEHLLLKMLETPLCDVRQILKRA GMDVDELAALLQPNAVDKGFESGYPSFSPLLVEWLQDSWLLASAELQHAHLRSGVLLLVL LMTPTRYLSAAVTRQLAQINRELLRQQFDEWVKDSAETEVVSAAGATPELAAAATTQLSR YTQNVTESARQGKLDPVLCRDHEIDLMIDILSRRRKNNPIVVGEAGVGKSALIEGLALRI VAGLVPERLRDVELLTLDLGAMQAGASVKGEFEKRFKGVMQEVKEAPKPVVLFIDEAHTL IGAGNQAGGLDVSNLLKPALARGELRTIAATTWSEYKKYVEKDAALSRRFQLVKVGEPNV DEATVILRGLRSIYEQSHGVLIDEEALQAAANLSARYISGRQLPDKAIDVLDTACARVAI NLTTPPRAVSQLQTRLHQQALEIAQLERQGRIGLGDTAERLATLRDASETDAATLAQLEA DWQRQKTLVQQIVALRTALLADEAPEDFDAAAAAAELADSERALAELQQPSVLVSPHVDK TQIASVIAEWTGVPLNRISQGELDVVTRLPDYLGDSIKGQQLAIAQLHKHLLTARADLRR PGRPLGAFLLVGPSGVGKTETVVQIADLMFGGRNYLTTINMSEYQEKHTVSRLIGSPPGY VGFGEGGVLTEAIRQKPYSVVLLDEVEKAHPDVLNLFYQAFDKGELADGEGRVIDCRNVV FFLTSNLGFQTIVNFAEHVNVADRPGELLDALYPELAAFFKPALLARMEVIPYLPLDHDT LVAIVQGKLSRLVTLLQQRFGAEVVIDASVPEEILRLANRSENGARMLESVIDGALLPPV SLQLLQRMSAGQPVSRIHFRVEDGQFRSEVEG NT seq 2619 nt NT seq  +upstreamnt  +downstreamnt gtgattcgaatcgaactgccgatcctggttgagcgactcaacccgctgtgccgccacatg atggaagaggcggcggcgctgtgcattcagcatcagggcgcggagatccgcattgagcac ctgctgctgaaaatgctggagacgccgttgtgcgacgtgcgtcagatcctgaaacgcgcc gggatggatgttgacgaactggcggcactgctgcagcccaatgccgtggacaaagggttt gagtcaggctatccctcattttcgccgctgctggtggagtggttgcaggacagctggctg ctggcctcggcggaactccagcacgcccatctgcgcagcggcgtgctgctgctggtgctg ctgatgacgccgacgcgttatctgtcggcggcggtgacccgccagttggcgcagattaac cgcgaactgctgcgtcagcagtttgacgaatgggtgaaagattcagcggaaaccgaagtg gtttccgccgctggcgcgacgccggagctggcggccgcggccaccacccaactgtcccgc tatacccagaatgtcaccgagtccgcccgtcagggcaagctggacccggtattgtgccgc gatcatgaaatcgacctgatgatcgatattctgtcccgccgtcgtaaaaataacccgatc gtggtcggcgaggccggggtgggtaaaagcgcgctgattgaaggactggcgctacgcatt gtcgccggtctggtgccggaacggctgcgtgatgtggaactgctgacgctggatttgggc gcgatgcaggccggcgcgtcggtgaaaggcgagttcgagaagcgtttcaaaggcgtgatg caggaagtaaaagaggcgccgaaaccggttgtcctgttcatcgacgaagcccacacgttg attggcgccggcaatcaggccggcgggctggatgtgtccaacctgcttaaaccggcgctg gcgcgcggcgaactgcgtaccatcgccgccaccacctggagcgaatacaagaaatacgtg gaaaaagacgccgcgctgtcgcgtcgcttccaactggtaaaagtgggcgagccgaacgtc gacgaagccacggtgattttgcgcgggttgcgcagcatttacgaacaatcgcacggcgta ttgatcgacgaagaagcactgcaggcggcggctaatctgtccgcgcgttatatctccggg cgtcagttgccggacaaagcgatcgacgtactggataccgcctgcgcgcgcgtcgccatc aacctgaccacgccgccgcgcgcggtcagccagttgcagacccgtttacatcagcaggcg ttggaaatcgcccaactggagcgtcagggccgcatcggcctgggcgatacggcggagcgg ctggcgacgctgcgtgacgccagcgaaacggatgcggcgacactggcgcaactggaagcc gactggcagcggcagaaaacgctggtgcagcagatcgtcgccctgcgcaccgcactgctg gccgatgaagcgccggaagatttcgatgccgccgccgcggcggctgaactggccgacagc gagcgagcattggccgaactgcaacagccgtcggtgctggtgtccccgcatgtggataaa acccagattgcgtcggtgatcgccgagtggaccggggtgccgttgaaccggatttcccag ggcgagctggacgtggtcacccgtctgccggattacctcggcgacagcatcaaagggcag caactggcgatcgcacagttgcacaagcacctgctgaccgctcgcgccgacctgcgccgt cccggtcgaccgctgggcgcgtttttgctggtggggccgagcggcgtgggcaagaccgaa accgtggtgcagattgccgatctgatgttcggcggccgtaattatctcaccaccatcaac atgtccgagtaccaggagaagcatacggtttcccgcttgatcggttcgccgccggggtat gtcggctttggcgaaggcggggtgctgaccgaggccattcgccagaaaccctactcggtg gtgctgctggatgaagtggaaaaagctcatccggacgtgctcaacctgttctatcaggcg tttgacaagggcgaactggcggacggcgaagggcgggtgatcgactgccgcaatgtggtg ttcttcctgacttccaacctggggttccagacgattgtcaattttgccgagcacgtcaat gttgcggatcgaccgggcgaactgctggatgcgctctatccggaactggcggcgttcttc aaaccggcgttgctggcgcgaatggaagtgattccctacctgccgctggatcacgacacg ctggtggctatcgtgcagggcaaactgtcccgtctggttacgttgctgcagcagcgcttt ggcgccgaggtggttatcgacgcatcggtgccggaagagatcctgcgtctggcgaaccgc agcgagaacggcgcgcgcatgctggagtcggtgatcgacggcgcactgttgccgccggtg tcgttgcaattgctgcaacgcatgtcggccggccagccggtcagccgcattcatttccgg gtggaagacggccagttccggtccgaggtggagggctga

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