Dickeya fangzhongdai ND14b: LH89_06125
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Entry
LH89_06125 CDS
T03347
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced03030
DNA replication
ced03430
Mismatch repair
ced03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LH89_06125 (holA)
03430 Mismatch repair
LH89_06125 (holA)
03440 Homologous recombination
LH89_06125 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ced03032
]
LH89_06125 (holA)
03400 DNA repair and recombination proteins [BR:
ced03400
]
LH89_06125 (holA)
Enzymes [BR:
ced01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LH89_06125 (holA)
DNA replication proteins [BR:
ced03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LH89_06125 (holA)
DNA repair and recombination proteins [BR:
ced03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LH89_06125 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AIR68805
LinkDB
All DBs
Position
1413428..1414459
Genome browser
AA seq
343 aa
AA seq
DB search
MIRIYPEQLTAQLHEGLRGCYLLFGNEPLLLQESQDQIRTVARQQDFLEHFSFTLDNNTD
WDAIFSTCQALSLFASRQTLLLILPDAGPGAPISEQLVKLSTLLHPDILLMVRGSKLTKA
QENSAWFKTLSQHGVYVPCMTPEQEQLPRWVAHRAKNMKLELDDAASQLICYCYEGNLLA
LVQALERLSLLYPDGKLTLPRVEQAVNDAAHFTPFHWLDALLGGKSKRAWHILQQLRQEE
CEPVILLRTVQRELLLLLQLKRRMATTPLRTLLDQHKVWQNRRPLLTQALQRLSLTQLQQ
AITLLSRLEITLKQNYGQPVWAELETLSMILCGKALPDGLLEV
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgattcggatctatcccgaacaactgaccgcgcagctccatgaggggctgcgcggctgt
tatctgctgttcggcaatgaacccttattgctgcaggagagtcaggatcagatcaggact
gtcgcccgtcagcaagattttctggaacacttcagtttcacgctggataacaacaccgac
tgggacgcaattttttccacttgtcaggcgctcagcctgttcgcatcccgccagaccctg
ctgctgattctgccggacgcaggtcccggcgcccccatcagcgagcaactggtcaagctc
tccaccttgttgcatcccgacattctgttgatggtacggggcagcaagctcaccaaagcg
caggaaaacagcgcctggttcaaaacgttgtcgcaacatggcgtgtacgtcccctgcatg
acgcctgaacaggaacaactcccccgctgggtggcgcatcgcgctaaaaacatgaagctg
gaactggatgacgccgccagccagttgatttgctattgctatgaagggaatctgctggcg
ctggtgcaagcgctggagcgactgtcgctgctgtatccggacggcaagctgacgctgccg
cgggtcgaacaggcggtcaacgatgccgcgcatttcacgccgttccactggctggatgcg
ctgttgggcggcaaaagcaaacgcgcgtggcacattttgcagcagttacggcaggaagag
tgtgagccggttattctgctgcgcaccgtgcagcgggaactgctgttgctgctacagtta
aaacgacgcatggcgaccacgccgctgcgcacgctgcttgaccagcataaggtgtggcaa
aaccgacgtccgctgttgacgcaggcattgcaacgtctgtcgctgacgcaattacagcag
gcgattaccctgctgagccggctggagatcaccctgaaacagaattacgggcaaccggtc
tgggcggaactggaaacgctgtcgatgattctgtgcgggaaagcgctgcccgacggcctg
cttgaggtatag
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