Dickeya fangzhongdai ND14b: LH89_06340
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Entry
LH89_06340 CDS
T03347
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
ced
Dickeya fangzhongdai ND14b
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ced02000
]
LH89_06340
Transporters [BR:
ced02000
]
Other transporters
Pores ion channels [TC:
1
]
LH89_06340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AIR68847
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All DBs
Position
1453461..1455632
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AA seq
723 aa
AA seq
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MNNLHWQKGWPLLALLPFSLQAATTQADSDTAAKNTKKQEDTMVVTASTPASGARETGYQ
PHNAVTGTRTESRLLDIPQAVNVVPQQVLEDQAARNLDEALYNVSGITQANTLGGTQDAV
MKRGFGDNRDGSILRDGMRSIQARNVTPTTERVEVLKGPASMLYGWGEPGGMINIISKKP
ELVQKTHIEGWNSSFNGGGGQLDVTGPLGTSGLAYRMIVDHDETDYWRNFGRNRQTTIAP
SLMWYGENTTVRVSYEHMEYLTPFDRGTVIDSRTGKPVNTPRERRFDEAYNATRGDQDTL
TFQMESAISDRWKTKLNYAYSRNTYNDNQARAMSLNPNTGLLTRRSDATQDAHSQSQNVQ
LTLNGDIDWGSINHQLLFGFDHEADRTHRGNMIRGTTNNRFNIYNPVYGLFPASTSVIAT
ESDQKDDVDSTGVFMQDAIRLDEHWMLLGGVRYDRFDVMSGKGRPFVTNTDRSDSRLVPR
AGVVYNLTSYASLYTSYSESFKPNSAINKAIGATMEPEVGRSYEIGAKLDLPNRITANLA
LFDIQKRNVMVDESQTINGITETVTRTAGKARSQGVEVDVAGKLTDSLSLIGSYAFTDAR
VTSDPDNQGNEMTNVARHTASLFLTNDFGNLGLHAGDDLRAGIGARYVGRRPGDAANSFF
LDDYTVADAFVTYSVPINGYKVKWQLNVKNLFDKTYYPSGGNSQYYVAIGDPREVVLRAS
VDF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaataaccttcactggcaaaaaggctggccgttgctggccctgctgcccttcagtctt
caggccgccactacacaggccgatagcgacaccgccgcaaaaaacacaaaaaagcaggaa
gacacgatggtggtgaccgccagcacgcccgcaagcggcgcacgggaaaccggctaccag
ccgcacaacgccgtcaccggcacccgtaccgagagccgcctgctggacataccgcaagcc
gtcaatgtggtgccgcagcaggtactggaggatcaggcggccagaaatcttgatgaagcg
ttatacaacgtcagcggcatcacccaggccaacaccctcggcgggacgcaggacgcggtg
atgaagcgcggtttcggcgataaccgagacggttccatcctgcgcgacggcatgcgttca
attcaggcgcgcaacgtcaccccgaccaccgagcgggtggaagtgctgaaaggaccggca
tcaatgctgtacggctggggcgagcccggcggcatgatcaacatcatcagtaaaaaaccg
gagctggtgcagaaaacccatatcgaaggctggaacagcagtttcaacggcggcggcggc
cagttggacgtcaccggcccgctcggcacctccggtctggcttatcgcatgattgtcgat
cacgatgaaaccgactactggcgcaacttcggccgcaaccgccagaccaccattgcgccg
tcgctgatgtggtacggtgaaaacaccaccgtgcgggtgtcctacgagcacatggaatac
ctgacgccgttcgatcgcggcaccgtgatcgacagccgtaccggcaagccggtcaatacc
ccgcgcgaacgccggtttgacgaagcctacaacgccacccgcggcgatcaggacacgctg
accttccagatggaaagcgccattagcgatcgctggaaaaccaagctgaattacgcctac
agccgtaatacctataatgacaatcaagcacgtgccatgtctcttaaccctaacaccggg
ttattaacacgccgatctgatgcgactcaggacgcccacagccagtcacagaatgtgcag
ttgacactgaacggtgatatcgactggggcagcatcaaccatcagttgctattcggtttc
gatcacgaggcagaccgcacccatcgcggcaatatgattcgtggtacaacaaataaccgc
tttaatatctataacccggtgtacggtttattccccgcatccacatctgttatcgctaca
gaaagtgatcagaaagatgatgtcgatagcaccggcgtcttcatgcaggacgccattcga
ctggacgagcattggatgctgttgggcggcgtgcgatatgaccgttttgatgtcatgtca
ggcaagggacgtccattcgtgacgaatactgaccgatcagacagccgactggtgccacgc
gcaggtgtggtttataacctaacctcttacgcatcgttgtacaccagttacagtgaatcc
tttaagcccaactccgccatcaataaagcgataggggcgacgatggaaccagaagtcgga
cgttcttatgagattggcgccaagctggatctcccgaaccgcatcaccgctaatctggcg
ctgtttgatatccagaaacgcaacgtgatggtggatgagtctcagaccatcaatggcata
accgaaaccgtcacccgtaccgccggcaaggcccgctcgcaaggggtggaagtggatgta
gcgggcaaactgaccgacagcctgagtctgatcggttcctacgcctttaccgatgcccgc
gtcacctcagacccggacaatcagggtaacgaaatgaccaacgtggcgcgccataccgcc
tcgctgttcctgaccaacgacttcggcaatctgggcctgcacgccggcgacgatctgcgc
gccggcatcggcgcccgctacgtcggccgtcgccccggcgacgccgccaacagcttcttc
cttgacgactacaccgtggctgacgcctttgtgacttacagcgtgccgatcaacggttac
aaggtgaaatggcagcttaacgtcaagaacctgttcgacaagacttactacccgtcgggc
ggcaacagccaatactatgtggcgattggcgacccgcgtgaagtggtgttgcgcgccagc
gtcgacttctaa
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