Dickeya fangzhongdai ND14b: LH89_06440
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Entry
LH89_06440 CDS
T03347
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ced
Dickeya fangzhongdai ND14b
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ced03032
]
LH89_06440
03400 DNA repair and recombination proteins [BR:
ced03400
]
LH89_06440
Enzymes [BR:
ced01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LH89_06440
DNA replication proteins [BR:
ced03032
]
Prokaryotic type
DNA Topoisomerases
LH89_06440
DNA repair and recombination proteins [BR:
ced03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LH89_06440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF3450
Motif
Other DBs
NCBI-ProteinID:
AIR68865
LinkDB
All DBs
Position
complement(1479575..1482208)
Genome browser
AA seq
877 aa
AA seq
DB search
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMSKIAHELLSDLDKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLTEVINGCLAYIDDENISVEGLMTYIPGPDFPTAAIINGKRGIEEAYRTGRGKV
YIRARAEVEADAKSGRETIIVHEIPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNHLYSQTQMQVSFGINMVALHQGQPKLMTLKEILAAFVRHRRE
VVTRRTIFELRKARERAHILEGLAIALANIDPIIELIRHAATPAEAKNALVAQAWALGSV
AAMLERAGDDAARPEWLEPEFGIHEGKYHLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLEQIAELLFILRSPERLMEVIREELEAIREQYNDARRTEITHNSADINIEDLISEENVV
VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WLKVYQLPEASRGARGRPIINLLPLEQDERITAILPVREYEEGMNVFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNDGDELIGVDLTDGSNEVMLFSAEGKVVRFSESAVRTMGRTATG
VRGINLQNDDLVVSLIVPRGEGDILTVTQNGFGKRTAVTEYPVKSRATKGVISIKVSERN
GKVVGAVQVDSADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAEDERVVGLQRVA
EPVEDDELDSVVPVDGELPEEDIDEPENDDDTPADDE
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaattacaccggtcaacatcgaggaagagctgaaaagttca
tatctggattacgccatgtccgtcatcgtcgggcgtgcgttaccggacgttcgcgatggt
cttaagccggtacaccgccgcgtgctgtacgcgatgagtgtgctgggtaacgactggaac
aagccttataaaaaatcggcccgtgtggtcggggacgttatcggtaaatatcacccgcat
ggtgatagcgcggtttacgacactatcgtgcgtatggctcagccgttctcgctgcggtac
atgctggtggacggccagggcaacttcggttccatcgacggcgactccgccgcggcgatg
cgttataccgaagtgcgcatgtcgaaaatcgcccacgaactgctttccgatctggataaa
gagacggtggattttgtgcctaactacgacggcacagagcagatcccggacgtgatgccc
acccgtatccccaacctgctggtcaacggttcttccgggatcgcggtggggatggcgacc
aacattccgccccataacctgacggaagtgattaacggctgtctggcctatatcgatgat
gaaaacatcagcgtcgaagggctgatgacctatattccggggccggacttcccgaccgcc
gccatcatcaacggcaagcgcggcattgaagaagcctaccgcaccggccgcggcaaagtg
tatatccgcgcccgcgccgaagtggaggctgacgccaaatccggccgtgaaaccatcatc
gtgcatgaaatcccttatcaggtgaacaaggcgcgactgattgaaaagatcgccgagctg
gtaaaagagaagcgcattgaaggtatcagcgcgctgcgtgacgagtccgacaaggacggc
atgcgcatcgtgattgaaatcaagcgcgatgcggtaggcgaggtggtgctcaaccatctg
tactcccagactcagatgcaggtgtcgttcggcatcaacatggtggcgctgcatcagggc
cagccgaagctgatgaccctcaaggaaattctggcggcatttgtccgtcaccgccgcgaa
gtggtgacgcgtcgcaccattttcgaactgcgcaaagcgcgcgaacgcgcccatatcctg
gaaggtctggcgattgcgctggctaatatcgacccgatcatcgagctgatccgtcatgcc
gctaccccggccgaagccaaaaatgcgctggtggcgcaggcgtgggcgctgggcagcgtg
gccgccatgctggagcgcgccggcgatgacgctgcgcgtccggaatggctggagccggag
ttcggcatccacgagggtaaatatcacctgaccgaacagcaggcgcaggcgattctggat
ctgcgtctgcagaaactgaccggtctggaacatgaaaaactgttggatgaatacaaggaa
ttgctggagcagatcgccgagctgctgttcatcctgcgcagtcctgaacgtctgatggaa
gtgatccgcgaagagctggaggcgatccgcgagcagtacaacgacgcgcgtcgtaccgag
atcacccataacagcgccgacattaatattgaagacctgatctctgaagagaacgtggtg
gtgaccctgtcgcatcaggggtacgtcaagtatcagccgctgagcgactatgaagcccag
cgtcgtggcggcaaaggcaaatccgccgcccgcatcaaggaagaggactttattgatcgg
ctgctggtggcgaatacccacgacaccattctgtgtttctccagccgtggccgtctctac
tggctgaaagtgtatcagttgccggaagcgagccgcggcgcccgcggtcgtccgatcatc
aacctgttgccgttggagcaggatgaacgcattaccgccattctgccggtgcgcgagtac
gaagagggcatgaacgtgttcatggccacggccagcggtacggtgaagaagaccgcgctg
accgagtttagccgtccgcgcagcgccggtatcatcgccgttaatctcaacgacggcgac
gagctgattggcgtcgacctgaccgacggcagcaatgaagtgatgctgttctccgccgaa
ggcaaggtggtgcgtttctccgaatcggctgtacgtactatgggacgtaccgctaccggg
gtgcgcggcatcaacctgcagaacgacgatctggtggtgtcgctgattgtgccgcgcggc
gaaggcgatattctgactgtgacgcaaaatggcttcggcaagcgtaccgccgtcaccgag
tatccggtgaaatcccgtgccaccaaaggcgttatctccatcaaggtgagcgagcgcaac
ggtaaggtggtcggtgcggtgcaggtcgattccgccgatcagatcatgatgatcaccgat
gccggtacgctggtgcgtactcgtgtatccgaggtcagcatcgttggccgtaatactcag
ggcgtgacgctgattcgtaccgctgaggacgagcgagtggttggtctgcagcgtgtggct
gagccggtggaagacgatgaactcgacagcgtggtgccggttgacggcgaactgccggaa
gaggacatcgatgaaccggagaacgatgacgatacgccggcagacgatgaataa
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