Dickeya fangzhongdai ND14b: LH89_06545
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Entry
LH89_06545 CDS
T03347
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced03030
DNA replication
ced03430
Mismatch repair
ced03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LH89_06545
03430 Mismatch repair
LH89_06545
03440 Homologous recombination
LH89_06545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ced03032
]
LH89_06545
03400 DNA repair and recombination proteins [BR:
ced03400
]
LH89_06545
Enzymes [BR:
ced01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LH89_06545
DNA replication proteins [BR:
ced03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LH89_06545
DNA repair and recombination proteins [BR:
ced03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LH89_06545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_tau_4
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
AAA_18
AAA_14
AAA_16
AAA_2
ResIII
TsaE
AAA_assoc_2
AAA_7
nSTAND3
AAA_24
PIF1
Mg_chelatase
SKI
TFIIA
Motif
Other DBs
NCBI-ProteinID:
AIR68886
LinkDB
All DBs
Position
complement(1508816..1510819)
Genome browser
AA seq
667 aa
AA seq
DB search
MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTTIARLLAK
GLNCETGITATPCGQCDTCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFHLKALDA
EQIRQHLQQVLEQEQLASEPRALQLLARAADGSLRDALSLTDQAIAMGQGQVTAAAVSQM
LGTLDDEQPLALIEALVKGDGAGVMALMGQAASRGVDWEALLVETLTLLHRIAMLQLLPS
ALGEEYNQVAPRLRELARVIPPAEVQLYYQTLLVGRKELPYAPDRRMGVEMTLLRALAFH
PSQTIAEPVPVSAPSAMPASLPVEPARVPPSVRASAMPAASGDEPAARAIPATGSEPAPP
PTPDSNLPDATAQLLQARSQLLSRQGNTPTKKTEPAASGKTRPVNSALERLASVTERGQQ
QMAAKAVAQEEQKKQEAYRWRAQKKTEQVETAPVTTPKALRSALEYEKTPELAARLAVEA
IERDAWAAEIDRLTLPKLVQQLALNAFKEMPEEGAIHLHLRSSQRHLNSAAAQKTLSEAL
VTHYGRPISLTVTEDDTPAVRTPLEWRQAIYEEKLAQARQSIMADNNIQTLRRFFDAELD
EESIRPV
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggttcttgcccgtaagtggcgtccccaaacctttgctgacgtggtagga
caggaacatgtcctgacggcgttagccaatggtctttcgttaggccgtatccatcatgct
tacctgttttccggtacccggggcgtaggcaagacgactatcgcccgtctactggcgaaa
gggctgaattgcgaaaccgggatcacggctacgccctgcggccagtgcgatacttgccgg
gaaatcgaacagggacgattcgtcgacctgatcgagattgacgctgcatcccgcaccaaa
gtggaagatacccgcgacctgctggataacgtgcaatacgctccggcccgcggccgcttc
aaggtctacctgatcgacgaagtgcacatgctctcccgccacagcttcaacgcgttgttg
aaaacgctggaagagccaccgccgcatgtgaaattcctgctggcaaccaccgatccgcaa
aaactgccggtgacgattctgtcccgctgcttgcagtttcatctcaaagcgcttgatgcc
gagcagattcgtcagcatttgcaacaggtgctggagcaggaacaactggcctcggaaccg
cgcgcgctgcaattgctggcccgcgccgccgatggcagtctgcgcgatgcgctgagcctg
accgatcaggctatcgccatggggcaagggcaggtcaccgccgccgccgtcagccagatg
ctgggcacgctggatgatgagcagccgctggcgttgattgaagcgctggtgaaaggcgat
ggcgccggtgtcatggcgctgatggggcaggcggcgtcgcgcggcgtcgactgggaagcg
ttgctggtggaaaccctgacgctgctgcaccggattgccatgctgcagttgctgccttcc
gcattgggtgaagaatacaatcaggtcgcgccccggctgcgtgaactggcgcgggtgatc
ccgcctgccgaggtacagctctactatcagacgctgctggtggggcgcaaggagttgccg
tacgcgccggatcgccgtatgggcgtggaaatgaccctgttgcgggcgctggcgtttcat
cccagccagacgatcgccgaaccggttccagtcagcgcgccatccgcgatgcctgcgtcg
ttacccgtcgaaccggcgcgcgtgccgccatcggttagagccagcgcgatgcctgccgca
tccggcgatgaaccggcggccagagctattccggcaacgggcagcgaaccggcaccacca
ccaactccggacagcaatttgccggatgcgaccgcccagttgctgcaggcgcgcagccag
ttgcttagccgacagggaaataccccgacaaaaaagactgaaccggcggcgtcaggaaaa
acgcggccggtaaactcggcgctggagcggctggcttcggtgaccgagcgtggtcagcag
caaatggcggccaaagccgtggcgcaggaagagcagaaaaagcaggaggcttatcgctgg
cgggcgcagaagaaaaccgagcaggttgaaacggcgccggtgactacgcccaaggcgcta
cgctcggcgctggaatatgaaaagacgccggagctggcggcaaggctggcggtggaagcc
atcgaacgcgatgcctgggcggcggaaatcgatcgtctgacgttgcctaagctggtacaa
cagttggcgcttaatgcgtttaaagagatgccggaggagggtgcgattcacctgcacttg
cgctcttcccagcgccatctgaattcggcggcggcgcagaaaacgctgtcggaggcgctg
gtgacgcactacgggcgtccgatcagcctgactgtcaccgaagacgatacgccggcggtc
cgtacgccgctggagtggcgtcaggccatttatgaagagaagctggcgcaggcgcgccag
tccatcatggctgataataatattcaaacgctacggcgtttctttgatgcggaactggac
gaagagagtatccgccccgtttaa
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