Dickeya fangzhongdai ND14b: LH89_06675
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Entry
LH89_06675 CDS
T03347
Name
(GenBank) transcriptional regulator HU subunit alpha
KO
K03530
DNA-binding protein HU-beta
Organism
ced
Dickeya fangzhongdai ND14b
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ced03032
]
LH89_06675
03036 Chromosome and associated proteins [BR:
ced03036
]
LH89_06675
03400 DNA repair and recombination proteins [BR:
ced03400
]
LH89_06675
DNA replication proteins [BR:
ced03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LH89_06675
Chromosome and associated proteins [BR:
ced03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LH89_06675
DNA repair and recombination proteins [BR:
ced03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LH89_06675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AIR68911
UniProt:
A0A2K8QJ88
LinkDB
All DBs
Position
complement(1537725..1537997)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIDKIAADADISKAAAGRVLDAIIGSVTESLKAGDDVALVGFGTFSVRERAARTG
RNPQTGKEISIPAAKVPGFRAGKALKDSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtcacaattgatcgacaaaattgccgcagatgctgatatttccaaagcggca
gcagggcgtgtgttggatgcaattattgggtctgttactgaatctctgaaagcaggggat
gacgttgctttagtcggttttggtacgttctccgtgcgtgagcgcgcagcacgcaccggc
cgtaacccgcaaaccgggaaagaaatcagcattccggccgctaaagtgccgggtttccgt
gctggcaaggcactgaaagactcagtgaattga
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