Dickeya fangzhongdai ND14b: LH89_07460
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Entry
LH89_07460 CDS
T03347
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LH89_07460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ced03019
]
LH89_07460
Messenger RNA biogenesis [BR:
ced03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LH89_07460
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GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
AIR69058
UniProt:
A0A2K8QIV2
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Position
complement(1707960..1708487)
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AA seq
175 aa
AA seq
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MIDDDGYRPNVGIVICNRQGQVLWARRYGQHSWQFPQGGINPGESAEQAMYRELFEEVGL
RKKDVRILASTRSWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLMCNESDINMQSSGTPE
FDGWRWVSYWYPVRQVVSFKRDVYRKVMKEFVIAVMQLQENSATRMSSGTRRKRG
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacgatgatggctaccgcccgaatgttggtattgtaatttgtaatcggcagggg
caggtattgtgggcccgtcgctacggtcagcactcctggcagtttcctcaagggggaatc
aaccccggagaaagcgcggaacaagcgatgtaccgcgaactgttcgaggaggttgggctg
cggaaaaaggacgttcgtatcctggcttccacccgaagctggttacgctataaattgcca
aaacgtttggtgcgttgggatacaaaaccggtatgtatcggccaaaagcaaaaatggttt
ctgctacagttaatgtgtaatgaatcagacatcaacatgcaaagcagcggcaccccggaa
ttcgacgggtggcgctgggtgagctactggtatccggtacgccaggtggtgtcgtttaaa
cgtgacgtttatcgaaaggtgatgaaggaattcgtcatcgccgtgatgcagctacaggag
aattcggctacccgaatgtcatcaggaaccagacgaaaacgaggataa
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