Dickeya fangzhongdai ND14b: LH89_07900
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Entry
LH89_07900 CDS
T03347
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LH89_07900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ced03400
]
LH89_07900
Enzymes [BR:
ced01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LH89_07900
DNA repair and recombination proteins [BR:
ced03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LH89_07900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AIR69132
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All DBs
Position
1819464..1820138
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AA seq
224 aa
AA seq
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MTPSPLPFDEPQALAHLAAIDAHWARLIEGVGHIRFESRPAREPYDALIRAVASQQLSNR
AAAAIIGKLQLRFEVGEGGFPSAEQLTACEPEVLRQCGFSARKIDTVKGIAQGVLSGLVP
GRAEAEHLDDETLIERLCSLKGIGRWTVEMLLISTLERMDIMPVDDLGIKQGFRYLYRLS
QDPTRKAMLEMSEPCRPYRTLAAWYLWRIPHMPDYAEYRASLRQ
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgacgccatcgccgctcccgttcgacgaaccccaggctctcgcccatcttgccgccatt
gacgcgcactgggcgcggctaatcgaaggcgtcggacatattcgttttgaaagccgcccg
gcgcgggaaccttacgacgcgctgattcgggcggtcgccagccagcaactcagcaaccgt
gccgccgcggccatcatcggtaaattgcagttgcgcttcgaggtcggtgaaggcggcttt
ccctccgccgagcaactgacggcatgcgaaccggaggtcttgcgccagtgcggcttttcc
gcccgcaaaatcgacacggtcaaaggaattgctcagggggtactgagcgggctggtgcca
ggacgggcggaggcggaacatctggatgacgaaaccttgatcgagcggctttgctcgctg
aaaggcatcggccgctggacggtggaaatgctgctgatctccacgctggagcggatggac
atcatgccggtggacgatctcggcatcaaacaggggtttcgttatctgtaccgcctgtcg
caggacccgacgcgcaaagcgatgctggagatgagcgaaccctgccgcccttaccgcacg
ctggccgcctggtatctgtggcgtattccccatatgccggattacgccgaataccgggcg
tcgctgcgtcagtaa
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