Dickeya fangzhongdai ND14b: LH89_07920
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Entry
LH89_07920 CDS
T03347
Name
(GenBank) transcriptional regulator
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
ced
Dickeya fangzhongdai ND14b
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ced03000
]
LH89_07920
Transcription factors [BR:
ced03000
]
Prokaryotic type
Helix-turn-helix
Other families
LH89_07920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
GAF_2
Mg_chelatase
AAA_5
AAA
HTH_8
MCM
GAF_3
AAA_2
IstB_IS21
AAA_16
AAA_19
AAA_22
DUF8009
DUF815
Diacid_rec
Motif
Other DBs
NCBI-ProteinID:
AIR69136
LinkDB
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Position
complement(1823771..1825297)
Genome browser
AA seq
508 aa
AA seq
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MPLSIDSFAHIAIELQQGLSTRDRFQRLLNSLRQLLCCDAAALLRYESQLLRPLATDGLA
PDVLGRRFRLSEHPRLEAIARAGDVVRFPADSQLPDPYDGLIPGQEALKVHACVGLPLFA
HHTLIGVLTIDGMDPHQFDHFSDEELRLIGAMASVALSNALLMEQLERQTLAPLPDAAPM
TEVDADEMVGLSAPMQQLKKEVAIVADSDLNVLIMGETGVGKELVARAIHQGSRRADRPL
VYLNCAALPESVAESELFGHVKGAFTGAIHHRTGKFELADNGTLFLDEIGELSLTLQAKL
LRVLQYGDLQRVGDDSSLKVDVRVLAATNRDLKQSVQEGAFRADLFHRLSVFPLSVPPLR
ARGQDIALLAGFFCERSRARLGLQRLALSPEATHLLARYPWPGNVRELEHVIYRATIVAR
AGEATGDLTLRPEHLNLDGVLPDAPRLAAVDTVPPWRGISLRDATEHYQRQVISDTLARH
QGNWSSCARELAVDSGNLHRMAKRLGIK
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgccgctatcgatagattcctttgcgcacattgccattgaactgcaacaagggctttca
acccgggaccgttttcagcgcctgctcaacagcttgcgccagctgttatgctgcgatgcg
gcagcgttgctgcgttatgaaagccagttgctgcgcccgctggcgaccgatggcctggcg
ccggacgtgctggggcggcgtttccggctgtccgagcatccccggctggaggcgatagcc
cgggcaggcgacgtggtgcgtttcccggcggacagtcagcttccggatccttacgatggc
ctgattcccggtcaggaagcgttgaaggtccatgcctgcgttggtctaccgctgtttgct
caccacacgttgatcggcgtgctaaccattgatggtatggatccccaccagttcgatcat
ttcagcgatgaggagctgcggctgattggcgcgatggcgtccgttgccttgagcaatgcg
ttgctgatggagcaactggaacgacaaacgctggcgccgctgccagacgccgctcccatg
acagaggtggatgctgatgagatggtgggattgtctgcgcccatgcagcagttgaaaaaa
gaagtggctatcgtggccgacagcgatcttaacgtgctgatcatgggggaaaccggggtc
ggcaaggagttggtggcgcgggccatccatcagggatcgcggcgtgcggaccgcccgctg
gtgtatctgaactgtgccgcgctgccggagtcggtggcggaaagcgagctgttcggccac
gtgaaaggggcgtttaccggcgcgattcaccatcgtaccggtaagtttgaactggcggac
aacggtacgctgtttctggatgaaattggcgagttgtcgctgacgttgcaggccaagctg
ctgcgggtgttgcagtacggcgatttgcagcgcgtaggcgacgacagtagcctgaaagtg
gatgtgcgcgtgctggcggccaccaaccgggatttaaaacagtcggtgcaggaaggcgct
tttcgcgccgatctgttccatcgcctgagcgtgtttccgctgtcggtgccgccgctgcgg
gcgcgcggtcaggatattgctttgctggccgggtttttctgcgaacgtagccgggcccgg
ttagggttgcagcgtctggcgttgtcgccggaagcgacccatttgctggcgcgttatccg
tggccggggaatgtgcgcgagctggaacatgtgatctaccgggcgaccattgtggcgcgg
gccggtgaggcgaccggcgatctgacattgcgcccggaacatttgaatctggacggcgtc
ttgcctgacgcacctcgcctggccgccgtcgataccgtgccgccgtggcgcggcatcagc
ctgcgggacgcgacggagcattatcagcggcaggtgattagcgacacgctggcgcgacat
cagggcaactggtcgtcctgtgcccgcgaactggcggtggatagcggtaacctgcaccga
atggcaaaacggctgggaataaaataa
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