Dickeya fangzhongdai ND14b: LH89_08685
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Entry
LH89_08685 CDS
T03347
Name
(GenBank) peptide ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LH89_08685
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ced02000
]
LH89_08685
Transporters [BR:
ced02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LH89_08685
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
oligo_HPY
AAA_22
SMC_N
AAA_16
AAA_33
AAA_29
TniB
AAA_18
nSTAND1
FtsK_SpoIIIE
DUF87
Motif
Other DBs
NCBI-ProteinID:
AIR69275
LinkDB
All DBs
Position
complement(2006539..2007363)
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AA seq
274 aa
AA seq
DB search
MEVDNLRVSFVNGRAVTDAVRGVSFSLGCEKLAIVGESGSGKSTVGRALLRLHPRSARIT
ADRLDFNGIDLLAADEARMRQIRGKRISMIMQDPKYSLNPVVCVGDQIAEAYLAHHRVSR
QAAKEKVIAMLDIVRIRQPERVYGLYPHEVSGGQGQRIMIAMMLITEPEVVIADEPTSAL
DVSVRLQVLAMLDDLVSERGLGLIFISHDINLVRSFCDRVLVMYAGRVVESIAAADLDHA
QHPYTRGLLNSLPDIDHPRPRLPVMNRDPAWLNP
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
ctggaggtggacaatctgcgggtgagtttcgtcaatggtcgcgcggtgaccgacgccgtg
cgcggcgtgtccttctcgctggggtgtgaaaagctggcgattgtcggcgaatccggctcc
ggcaaatccaccgtcgggcgcgcgctgttgcggctgcatccgcgtagcgcccgcatcacc
gccgaccggctggattttaacggcattgacctgctggcggcggatgaagcgcggatgcgc
cagattcgcggcaaacgcatctccatgatcatgcaggatcccaagtattcgctgaatccg
gtggtatgcgtcggcgatcagatcgccgaagcctatcttgcgcaccaccgcgtctcgcgg
caggcggcgaaggaaaaggtgattgcgatgctggatatcgtgcgcatccgccagccggaa
cgggtatacggcctgtacccgcacgaggtttccggcggtcaggggcagcgcattatgatc
gcgatgatgctgatcaccgagccggaagtggtgattgccgacgaaccgacctcggcgctg
gatgtctccgtgcgcctgcaggtgctggcgatgctggatgatctggtgagcgagcgcggt
ctggggctgatctttatcagtcacgacatcaatctggtacgcagcttctgcgatcgggtg
ctggtgatgtacgccggtcgggtggtggaatcgatagcggccgccgatctggaccatgcg
caacacccctacacccgaggtttgctcaattcattgccggatatcgatcatccgcggccg
cgcctgccggtaatgaatcgcgatcccgcctggcttaacccttaa
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