Dickeya fangzhongdai ND14b: LH89_08700
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Entry
LH89_08700 CDS
T03347
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LH89_08700
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ced02000
]
LH89_08700
Transporters [BR:
ced02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LH89_08700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
IDEAL
XylR_N
YoaP
Motif
Other DBs
NCBI-ProteinID:
AIR69278
LinkDB
All DBs
Position
complement(2009450..2011060)
Genome browser
AA seq
536 aa
AA seq
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MKARAILRTLLLSTLCMAATPAMLSAKTPDDQLIVGMNMNNMLSLDPAAMTGNEVVGVVV
NLYDSLVELDPDNLSHVLPALAKSWSVSDDGKVITFNLVDNAKFHSGNPVTAEDFVWSMN
RLLHLNMAQATTWKSYGFTADNVAKMIRAKDAHTVEIELPKPNDPKLIIYSLATLGSGSV
LDRKTVLQHEKNGDWGNGWLTTNEAGSGPFKLDVWQAKDVLRISRVSGYWQGDAKMKRVI
FRHMTESQALRLMIEKGDIDVATGMSVPDINALKQDKDVTVKEVTKGTLYYVAMSLKNPY
FANPKVREAVRYLIDYDGINNTVMTGYGFYHQRPIQKGMDATLPDPGYKLDVARAKTLLT
EAGYPNGFDTTLRVLSDQPFLNLATAVQSTLAQAGIKVQILSGTGNQVYGAMRDRKFDML
VGRGGGGVDPHPHSSLRSVVYNPDNSDEARLTNFQGWRTSFYDKQLNEMIDQALLEKDPQ
KQKQMYIDVQNRYEALYPAIIPVSQMIDSVVLRKDVMKYVPHPSSTTHLRDVYKQR
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcacgagcaatacttcgtaccctgctgttgagcacactgtgtatggccgccacg
ccggccatgctgtcagccaaaacccctgacgatcaactgattgtcggcatgaacatgaac
aacatgctgtcactggatccggccgccatgaccggcaatgaagtggtgggggtggtcgta
aacctctatgactcgctggtcgaactggaccccgacaacctgagccacgttttgcccgcg
ctggcgaaaagctggagcgtcagcgacgacggcaaagtcattaccttcaatctggtcgat
aacgcgaaattccattccggcaacccggtgaccgcggaagattttgtctggtcgatgaac
cggctgctgcatctgaacatggcgcaggcgaccacctggaaatcgtacggctttaccgcg
gataacgtcgcgaagatgatccgcgccaaagatgcccatacggtggagatcgaactgccc
aagcccaacgatccgaagcttatcatctactcgctggcgacgctgggcagcggctcggtg
ctggatcgcaagacggtgctgcaacacgagaaaaacggcgactggggcaatggctggctg
actaccaatgaagccggttccggccccttcaagctggatgtgtggcaggcgaaagatgtg
ctgcgcatcagccgcgtcagcggttactggcagggcgacgccaaaatgaagcgcgtcatt
ttccggcatatgaccgaatcgcaggcgctgcggttgatgatcgagaaaggcgacattgac
gtggcgaccggcatgtcggtgccggatatcaatgcgctcaagcaggataaagacgtgacg
gtgaaggaggtgaccaaaggcacgttgtattacgtggcgatgagcctgaagaacccgtac
ttcgccaatccgaaagtgcgcgaagcggtgcgttatctgatcgactatgacggcatcaat
aacaccgtgatgaccggctatggtttctatcatcagcgcccgatccagaaagggatggac
gccacgctgcccgatccgggctacaaactggatgtggcgcgggccaaaaccctgctgacg
gaagcgggctatccgaacgggtttgacaccacgctgcgcgtgctgtcggatcagccgttc
ctgaacctcgccaccgccgtgcagtccacgctggcgcaagccggcatcaaagttcagatc
ctctccggcaccggcaatcaggtttatggcgcgatgcgcgatcgcaagttcgacatgctg
gtcgggcgcggcggcggcggcgtcgatccccatccgcattccagcctgcgttccgtggtc
tacaacccggataacagcgacgaagccaggctgaccaattttcagggctggcgcacctcg
ttctacgacaaacaactgaacgagatgatcgatcaggcgttgctggaaaaggatccgcaa
aagcagaagcaaatgtacatcgacgtccagaaccgctatgaggcgctgtacccggccatt
atcccggtttcccagatgatcgattcggtcgtgctgcgcaaggatgtcatgaagtatgtg
ccgcatccgtcctccacgacccatctgcgggacgtgtacaagcaacgctag
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