Dickeya fangzhongdai ND14b: LH89_09030
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Entry
LH89_09030 CDS
T03347
Name
(GenBank) RNA polymerase subunit sigma-24
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LH89_09030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ced03021
]
LH89_09030
Transcription machinery [BR:
ced03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LH89_09030
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
GerE
HTH_VMAP-M9
Motif
Other DBs
NCBI-ProteinID:
AIR69336
LinkDB
All DBs
Position
2080414..2080953
Genome browser
AA seq
179 aa
AA seq
DB search
MSAVNTASPCDLQQLYQQHHGWLQGLLRKRLGNMCDAADLAHDIFVQLLTRPRHFDSHEG
ARAYLSVMAQGLCIDLWRRRALEQAWRQSLNDCEQVHALSAEQHTIILETLYQVDAMLRQ
LPDNVRVAFILAQIQGQTYAQIAITLGVSERMVKKYMAQAMLHCILLEAEHHGHEAMQR
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgtcaacaccgccagcccttgcgaccttcagcagctttatcagcagcaccac
ggctggctgcaggggctgctgcgcaaacggctgggcaatatgtgcgacgccgccgatctg
gcgcacgatattttcgtacagttgctgacccgcccgcgtcacttcgacagccatgaaggc
gcgcgcgcctacctcagcgtgatggcgcagggcctgtgcatcgatctgtggcgtcgtcgg
gcgctggaacaggcctggcggcagtcgctgaacgactgcgagcaagtgcatgcgctgtct
gccgagcagcacaccatcattctggaaaccctgtatcaggtcgacgccatgttgcgtcag
ttgccggacaacgtgcgcgtcgcctttatcctggcgcagattcaggggcaaacctacgcg
caaatcgccatcacgctcggcgtcagtgagcggatggtgaaaaaatacatggcgcaggcg
atgctgcactgcatcctgctggaagcggagcatcacggccatgaggcgatgcagcggtga
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