KEGG   Dickeya fangzhongdai ND14b: LH89_09030
Entry
LH89_09030        CDS       T03347                                 
Name
(GenBank) RNA polymerase subunit sigma-24
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
ced  Dickeya fangzhongdai ND14b
Pathway
ced02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ced00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LH89_09030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ced03021]
    LH89_09030
Transcription machinery [BR:ced03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     LH89_09030
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 Sigma70_ECF GerE HTH_VMAP-M9
Other DBs
NCBI-ProteinID: AIR69336
LinkDB
Position
2080414..2080953
AA seq 179 aa
MSAVNTASPCDLQQLYQQHHGWLQGLLRKRLGNMCDAADLAHDIFVQLLTRPRHFDSHEG
ARAYLSVMAQGLCIDLWRRRALEQAWRQSLNDCEQVHALSAEQHTIILETLYQVDAMLRQ
LPDNVRVAFILAQIQGQTYAQIAITLGVSERMVKKYMAQAMLHCILLEAEHHGHEAMQR
NT seq 540 nt   +upstreamnt  +downstreamnt
atgtccgccgtcaacaccgccagcccttgcgaccttcagcagctttatcagcagcaccac
ggctggctgcaggggctgctgcgcaaacggctgggcaatatgtgcgacgccgccgatctg
gcgcacgatattttcgtacagttgctgacccgcccgcgtcacttcgacagccatgaaggc
gcgcgcgcctacctcagcgtgatggcgcagggcctgtgcatcgatctgtggcgtcgtcgg
gcgctggaacaggcctggcggcagtcgctgaacgactgcgagcaagtgcatgcgctgtct
gccgagcagcacaccatcattctggaaaccctgtatcaggtcgacgccatgttgcgtcag
ttgccggacaacgtgcgcgtcgcctttatcctggcgcagattcaggggcaaacctacgcg
caaatcgccatcacgctcggcgtcagtgagcggatggtgaaaaaatacatggcgcaggcg
atgctgcactgcatcctgctggaagcggagcatcacggccatgaggcgatgcagcggtga

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