Dickeya fangzhongdai ND14b: LH89_09040
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Entry
LH89_09040 CDS
T03347
Name
(GenBank) TonB-dependent receptor
KO
K16088
outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Organism
ced
Dickeya fangzhongdai ND14b
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ced02000
]
LH89_09040
Transporters [BR:
ced02000
]
Other transporters
Pores ion channels [TC:
1
]
LH89_09040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
DUF6568
Motif
Other DBs
NCBI-ProteinID:
AIR69338
LinkDB
All DBs
Position
2082066..2084495
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AA seq
809 aa
AA seq
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MLRPQKPLVVALRLALLSLSLPYVIPASAAQESPATRHYALAAGPLGNQLNQLAGQAGIY
LAADASLTQGLSGPALQGDYTVDEALRRLLSGSGLTASRQADGSYVLRKPADGEEMYVIR
QPSLNGPTEDTGAYTTRNLSTATRMALSPRETPQSVSVVTRQQMDDQHMTSLEDAMAVST
GVTVVKESSYQTRFQSRGFMMDNVQEDGSGSSFQNSVSGMGSAESSSESPDLAIYDRLEI
LRGASGLLQGNGEPGGTVNLVRKKPTYDFRSTLSTSAGSWDHYRQEADVSGPLNSDGSLR
GRFVGVTQKKDSFVNEVHSERHVMYGTLAYDLTSDTTVTTGVNWQKTRTVPDLYGVPMST
DYASLNLPRSTFLGASWNRITFEKINAFAELEHRFSSDWTLKSALNYTHSTAVGRFTGIF
GNGTSGVGSSGTGRLNNMLARDNQADQWSYNLTLNGPFELLGRRHELVVGGDYQKENFDN
LFGRVINTNVVNVYNWNPDALAGPAWPAYSNNYTYDLYQRGLFTTARFTLADDWKLIVGT
RYSNFSYTNNLRNLSSGSATQTHFKANEQWTPYGGLLWDFADHYTWYLSYADIYKPQENI
DNRGNLLPAVTGKNYETGVKGEFFGGALNTSAALFRIVQENRAVEDINCQVSTTCYRADG
KVESQGLELEAAGKLATGWQLSAGYTLTNSKYLKSDESTQGRRYSLNTPQHQFKLYTSYQ
LPGSLNQWTVGAGLTAQTDTTTSRGVTQGGYTLLNANVNYQYNSHLSFNLAGYNLTDKVY
YVNVSNRHRGGNNFYGDPRNVMLTAKWAF
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
attctccgcccacaaaaaccgctggtcgtcgcgctgcgcctcgccctgctcagcctgtcg
ctgccgtacgtcattccagccagcgccgcgcaggaaagcccggcgacgcgccattacgcg
ctcgccgccggtccgcttggcaaccagttgaaccagctcgccgggcaggccggcatctat
ctcgccgccgacgccagcctgacgcaggggctgagcggcccggcgttgcagggcgattac
acggtggatgaggcgttacgccgcctgctgagcggcagcgggctgaccgcatcacgccag
gcggacggcagctacgtgctgagaaagccggcggacggtgaagaaatgtatgttatccgc
caacccagcctgaacggtccgaccgaagacaccggcgcctacaccacccgcaatctgagc
accgccacccgaatggcgctttcgccgcgcgaaacgccgcaatcggtcagcgtggtcacc
cgccagcagatggacgaccagcacatgacgtcgctggaagacgcgatggccgtatccacc
ggcgtcaccgtggtgaaagagagttcatatcagacccgtttccagtcccgtggcttcatg
atggacaacgtgcaggaagacggctccggcagttcattccagaacagcgtatcgggcatg
ggctcggcggaatcctccagcgagtcgcccgatctggcgatctacgatcggctggaaatt
ctgcgcggcgcgtccgggctgttgcagggcaacggcgagccgggcggcaccgtcaatctg
gtgcgcaaaaaaccgacctacgattttcgcagtacgctcagcaccagcgcaggcagttgg
gatcattaccgtcaggaagcggatgtgtccggcccactcaatagcgacggttcgctgcgc
ggccgttttgtcggcgttacccagaaaaaggacagctttgtcaacgaggtacacagcgaa
cgccatgtcatgtacggtacgctggcctatgatctcaccagcgacaccaccgtcaccacc
ggcgtcaactggcagaaaacccgcaccgtgccggatctctacggcgtaccgatgtctacc
gattacgccagcctgaacctgccgcgctccacctttctgggcgccagctggaaccggatc
accttcgagaaaatcaacgcgttcgccgaactggaacaccgcttcagcagcgactggacg
ctgaaaagcgcgctcaactatacccactccaccgccgtcgggcgctttaccggtattttc
ggcaacggcaccagcggcgtcggcagcagcggcaccgggcggctcaacaacatgctggcg
cgggataatcaggccgatcaatggagctataacctgacgctcaacgggccgttcgaattg
ctcgggcgtcgccatgagctggtggtgggcggcgattaccagaaagaaaacttcgacaac
ctgttcggccgggtgatcaacaccaacgtcgtgaacgtgtataactggaaccccgacgcg
ctggccggacccgcctggcccgcctacagcaacaattacacctacgatctctaccaacgc
ggcctgttcaccaccgcccgctttacgctggcggacgactggaagctgattgtcggcacc
cgttacagcaacttcagctataccaacaacctgcgtaatctcagcagcggctccgccacc
cagacccactttaaagccaacgaacaatggacgccgtacggcggcctgctgtgggacttc
gccgatcactacacctggtatctgagctacgccgatatctacaagccacaggaaaatatc
gacaaccgcggcaatctgctgcccgccgtcaccggcaaaaactacgaaaccggggtgaaa
ggcgagttcttcggcggcgcgctgaacacctcggcagcgctattccgcatcgtgcaggaa
aaccgggctgtcgaagatatcaactgtcaggtttccaccacctgctaccgcgccgacggc
aaggtggaaagtcaggggctggaactggaagcggccggcaaactggcgacaggctggcag
ttgtccgccggttatacgctgaccaacagcaaatatctgaaatccgacgagagcacgcag
gggcgccgctacagtctcaatacgccgcagcaccagttcaagctttacaccagctatcag
ttgcccggcagcctgaatcaatggacggtaggcgccgggctgaccgcgcaaaccgacacc
accaccagccggggggtgacgcagggaggttatacgctgctcaacgccaacgtgaactac
cagtacaactcacatctcagcttcaacctggccgggtataacctgaccgacaaggtgtac
tacgtgaacgtgtcgaaccgtcatcgcggcggcaacaacttctacggcgacccgcgcaat
gtgatgctaaccgccaaatgggccttctga
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