Dickeya fangzhongdai ND14b: LH89_09125
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Entry
LH89_09125 CDS
T03347
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ced
Dickeya fangzhongdai ND14b
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ced03016
]
LH89_09125 (truB)
Enzymes [BR:
ced01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LH89_09125 (truB)
Transfer RNA biogenesis [BR:
ced03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LH89_09125 (truB)
Prokaryotic type
LH89_09125 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AIR69354
LinkDB
All DBs
Position
complement(2103741..2104697)
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AA seq
318 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGASSNDVLQKVKRLFNANKAGHTGALDPLATGMLPICLG
EATKFSQYLLDADKRYRVIARLGQRTDTSDADGNVIQERPVTFTHDLLMQALDSFRGDTQ
QVPSMYSALKYQGRPLYEYARQGLTVPREARDITVYELQFIRWEGDELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLQVATYPIERMVTLEQLQALREQAEAQEQPIGELLDVL
LLPMDTAVQAFPEVNLSPVVAGYLKLGQAVRAAATPADGMVRITEGDARRFIGMGEIDDE
GRVAPRRLVVENPVPADA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtcctcgtcgccgcggccgggatatccacggcgttttgctgctggataaaccg
caaggagcatcgtccaacgatgtgctgcagaaggtaaaacgcctctttaatgccaataaa
gccgggcataccggcgcgctggacccgctggcaaccggcatgttgccgatatgtctgggt
gaggcgaccaagttttcccagtacctgctggatgccgataaacgctaccgggtgatagct
cgtctggggcagcgtacggatacctcggatgccgacggcaatgtgattcaggagcgtccg
gtaacctttacccatgacctgctgatgcaggcgctggacagtttccgcggcgatacccaa
caggtgccgtcaatgtattccgcgctgaaatatcagggtcgcccgctgtacgaatatgcg
cgtcaggggctgaccgtgccgcgtgaagcgcgtgatatcacggtgtatgagttgcagttt
atccgctgggaaggggatgagctggaactggaaatccattgttccaagggaacttacatc
cgcaccattattgatgatctgggcgagaagctggggtgtggcgcccatgtgatttacctg
cggcggttgcaggtggcgacttatccgatcgagcggatggtgactctggagcagttgcag
gcgttgcgtgaacaggcggaagcgcaggagcagccgatcggcgagttgctggatgtgctg
ctgttgccgatggataccgccgtgcaggcgtttccggaagttaatctgtcgccggtggtg
gcgggttatctcaagctggggcaggcggtgcgtgctgccgctacgccggctgacggtatg
gtgcgcatcaccgagggtgacgcgcgccggtttatcggtatgggggaaatcgatgacgaa
ggtcgggtcgcgccgcgtcgtctggtagtagaaaaccctgtgccggcggatgcctga
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