Dickeya fangzhongdai ND14b: LH89_10255
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Entry
LH89_10255 CDS
T03347
Name
(GenBank) ABC transporter
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LH89_10255
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ced02000
]
LH89_10255
Transporters [BR:
ced02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LH89_10255
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
RsgA_GTPase
AAA_16
AAA_29
AAA_22
oligo_HPY
nSTAND3
AAA_33
ATP-synt_ab
nSTAND1
MeaB
TsaE
AAA_23
DUF5906
NB-ARC
NACHT
DUF87
Mg_chelatase
AAA_13
KH_DEAH11_2nd
Motif
Other DBs
NCBI-ProteinID:
AIR69568
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All DBs
Position
complement(2341691..2343286)
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AA seq
531 aa
AA seq
DB search
MSELLRVEHLRVTAGGRALVQDISFTLNKGEVLGLIGESGAGKSTIGQAILGHCRHGMRI
DSGHIWFQNGDKNSDLAALSERQLRRVRGARIAYVAQSASASFNPAQRIGEQVIETAVRH
GVLSRQQAIARAIELFAQLSLPEPQIFFQRYPHQVSGGQLQRAMIAMAMCAGPDLIIFDE
PTTALDVTTQLGVLNAIDDIIRLTGVAALYISHDLAVVAQISHRIMVLRHGRQVETGDTA
PLLENPAEEYTRALLQARGEPKAPQPATDDVLLDIRHLDARYQQQPVLQDVSLQLARGRT
LAVIGESGSGKSTLGRTLCGLLAPAGGEIRLSGDALPPRLAQRSRAQLQAVQMIHQHPDT
ALNPRLPIGVQIERAMVCLTQLDAATRCSRVSDLLHQVGLPPEMAQRYPTALSGGQKQRV
CIARALAAQPSLIVCDEPTSALDPLVAREVLSLLRQIQQETGVAYLFITHDLHVVREVAD
TVAVLRQGRIVRQGPVAQALSPPLDDYTQQLLLAVPEMRCDWLREVMEKAY
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagttgctgcgggtcgaacatctgcgcgtcacggcgggcggtcgggcgctggtg
caggacatcagctttaccctcaataaaggcgaagtgctggggctgattggcgagtccggc
gcgggcaagtccaccatcggccaggcgattcttggccactgtcgtcacggcatgcgtatc
gacagcgggcacatctggtttcagaacggcgataaaaacagcgacctggcggcgttatcg
gagcggcagttacggcgggtgcgcggcgcgcgcatcgcgtatgtggcgcagtcggccagc
gcgtcattcaacccggcgcagcgcatcggcgagcaggtgattgaaacggcggtacgccac
ggcgtgctgtcgcgtcagcaggccatcgcgcgggcgatcgaactgtttgcacagctgtcg
ctgccggaaccgcagatctttttccagcgctacccgcatcaggtgtccggcgggcagttg
cagcgggcgatgatcgcaatggcgatgtgcgccggccccgacctgattatttttgacgag
ccgaccaccgcgctggacgtcaccacccagctcggggtgctcaacgccatcgatgatatt
atccgcctgaccggcgtggccgcgttgtatatcagtcacgatctggcggtggtggcgcaa
atcagccaccgcatcatggtgctgcgtcacggccgtcaggtggaaaccggcgacaccgcg
ccattgctggaaaacccggctgaagagtacacccgcgcgctgttacaggcgcgcggcgaa
cccaaagcgccgcaaccggcgaccgacgacgtcctgctggatatccgccatcttgatgcc
cgttaccagcagcagccggtattgcaggacgtgtcgctgcaactggcgcgcggacgcacg
ctggcggtgatcggcgaatccggctccggcaaatcgacgcttgggcgtaccctgtgcggg
ctgctggccccggcgggcggcgagattcggttgagtggcgacgccttgccgccgcgactg
gcgcagcgcagtcgcgctcagttgcaagctgtccagatgattcaccagcacccggatacc
gcgctcaatccgcgcttgccgatcggcgtgcagattgagcgggcgatggtgtgcctgacc
caactggacgccgcgacgcgatgttcgcgtgtgagcgacctgctgcatcaggttggattg
ccgccggagatggcgcagcgttatcccaccgcgctgtccggcggtcaaaaacagcgggta
tgcatcgcccgcgcgctggcggcgcagccgtcgcttatcgtctgcgacgaaccgacatcg
gcgttggacccgttggtggcgcgcgaggtgctctcgctactgcgccaaatccagcaggaa
accggcgtcgcctacctgttcatcacccacgatttacacgtggtgcgggaagtggccgac
accgtggcggtgttgcgccaggggcgcattgtccggcaggggccggtggcgcaagcgctg
tcgccgccgctggacgactacacgcagcaactgctgctggcggtgccggaaatgcgctgc
gactggctgcgggaagtgatggaaaaggcgtactga
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