KEGG   Dickeya fangzhongdai ND14b: LH89_10335
Entry
LH89_10335        CDS       T03347                                 
Name
(GenBank) CRISPR-associated protein Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
ced  Dickeya fangzhongdai ND14b
Brite
KEGG Orthology (KO) [BR:ced00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ced02048]
    LH89_10335
Enzymes [BR:ced01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LH89_10335
Prokaryotic defense system [BR:ced02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    LH89_10335
SSDB
Motif
Pfam: Cas3_HD Cas3-like_C_2 DEAD Helicase_C
Other DBs
NCBI-ProteinID: AIR69584
LinkDB
Position
complement(2360861..2363581)
AA seq 906 aa
MLSEPYFRYWGKARTFSNNENDAPYHLLPYHCLDVAACGYWLVKNNRFHVRDHLQALGLD
EECAALWLAWFLAWHDIGKFARGFQQLYQNPAAPLVRGAGQAYSMRHDSLGLWLWRFKLH
DNWREQTDWLPATSRPEKLHYAMDVWLRLVCGHHGQPPREEGNGALAFHPDDILAAQAYL
ADLHAVFPELTAFPASFSDKNWRVLLQQKSWPLAGSVVLADWLGSSQDDFPYRADPTLTL
AQYWRQCALPQAERSVSRLPAAAVAAPFTGMRNLFPFITRPTPLQQQAMTVEIDAPGPQL
FVLEDVTGAGKTEAALVLAHRLMSAGRGDGLYVGLPTMATANAMYRRLAKAYRALFDERV
APSLMLAHGARDMVTDFRLSLWGPAQAGQMRYGPDNEDSASAACNQWFADSRKKALLADV
GVGTLDQALMAVMAFRHQSLRLLGLGGKILLLDEVHAYDAYTGRLLESLLTFHASQGGSA
IILTATLAASQRERLVQAFGRGMRQPPGRLAEQAGYPWFTQVSAQALREWPVETRAEVRR
TVTVDWLSRRSEAIALIRQAVAAGQCVCWIRNTVDEAIDAWRQLRQCNEITVDDVLLFHS
RFAFCDRMVIEDTAIERFGKHSEGTQRRGKVLIATQVVEQSLDIDVDVMISDLAPVDLLI
QRAGRLQRHIRRTDGGCKQPDDAAPPRDERAPPVLWVLAPQWQPEAGSDWLGVELSGTGA
VYQHHAVLWRTQAILRERGALRMPEEARLLIDSVYEQRIPAPAALEERGYQAEGKSLGDR
TIASQSSLAFELGYCAAAGQRGWRDDAELFTRSGEASQDVYLAWRADSDDALPRPYAGEG
EFGWEKSRLSVRQRWWQQHEKQWPTLQGDALERFRQQLHRPGAEVLLLAPGEAADYYHAD
MGLVAR
NT seq 2721 nt   +upstreamnt  +downstreamnt
ctgttatctgagccctattttcgctattggggaaaagctcggacgttttccaataacgaa
aacgacgcgccttatcatttattgccttatcactgtctggatgtggcggcctgtggttat
tggctggtgaaaaataaccgttttcatgttcgtgaccatttgcaggcgttgggactggat
gaagagtgcgccgcattatggctggcctggtttttggcctggcacgatatcggcaagttc
gctcgtggttttcaacagctctaccagaaccctgccgcgccgttggtgcgtggggcgggg
caggcttattccatgcgccatgactcgctggggttgtggttgtggcgttttaagctgcat
gacaactggcgggagcaaacggactggctgcccgccacatcccgaccggaaaaactgcat
tacgcgatggatgtatggctgcggctggtatgtggccatcatgggcagccgccgcgggaa
gagggcaacggcgcgctggctttccatcctgacgatatattggcggcacaggcttatctg
gccgatctgcacgccgtgtttcctgaactgacggcatttcccgctagttttagcgacaaa
aactggcgggtgttgttgcaacagaaaagctggccgctggcaggcagcgtggtactggcg
gactggctcggttcatcgcaggacgattttccctaccgagctgatccgacgctgacgctg
gcgcaatactggcggcaatgcgcgttgccgcaggccgagcggtcggtgtctcgcctgcca
gcggccgccgtggcggcgccgtttacgggaatgcgcaacctctttccctttatcacccgg
ccgacgccgttgcagcagcaggcgatgacggtcgagattgatgcgcccggcccgcagctg
tttgtgctggaggatgtcaccggggcgggcaaaaccgaagccgcgctggtgctggcgcac
cggctgatgagcgccggtcgcggcgacggtttgtatgtcggcctgccgacgatggcgacc
gctaacgccatgtaccggcggttggcgaaggcgtatcgcgccttgtttgacgaacgagtg
gcgccatcgctgatgctggcgcacggcgcgcgcgacatggtgacggatttccgcctgtcg
ttatgggggcctgcgcaggcggggcagatgcggtacgggccagataacgaagacagcgcc
agcgccgcctgcaatcagtggtttgccgactcgcgcaaaaaagcgctgctggcggacgtc
ggcgtcggcacgctcgatcaggcgctgatggcggtgatggcgtttcgccaccagtcgctg
cggttgttagggctgggcggcaaaattctgctgctggatgaagtgcacgcctacgatgcc
tacaccggccgtctgctggaaagcctgctgaccttccacgccagtcagggcggcagcgcg
attattcttaccgccacgctggcggcatcacagcgggaacggctggtgcaggcgtttggc
cgggggatgcggcaaccgcctggccgtctggcggagcaggccggatacccgtggtttacc
caggtgagcgcgcaggcgctgcgggagtggccggtggaaacccgcgccgaggtccggcgc
acggtgacggttgactggctgtctcgccggtcggaagccatcgcgttgattcgtcaggcg
gtggccgccgggcagtgcgtctgctggattcgcaacacggtggatgaggcgattgacgcc
tggcgacagttgcgccagtgcaacgagataacagtggacgatgtgctgctgttccacagc
cggtttgcgttttgcgaccgcatggtgattgaagacaccgcgattgaacgctttggcaag
cacagcgaaggcacgcaacggcgcggtaaggtgctgatcgccacccaggtggtggagcag
tcgctggatattgatgtggatgtgatgataagcgatctcgcgccggtggatttgctgatc
cagcgcgccggacgcctgcaacgtcatatccgccggacagacggtggctgcaagcagccg
gacgacgccgcgccgccgcgcgatgaacgcgctccgccggtgctgtgggttctggcgccg
caatggcagcccgaggccggttctgactggctgggagtggaactgagcggtaccggcgcg
gtgtatcagcatcatgcggtgttgtggcgcacacaggcgatattgcgggaacgcggcgcg
ctgcgcatgccggaagaggcgcgtttgctgatagacagcgtctacgagcagcgcattccg
gcaccggcggcgctggaggagcgcggctatcaggctgaagggaaaagtctgggcgatcgt
accatcgcgtcgcagtcgtcactggcgtttgagctggggtattgcgccgccgccggtcag
cgcggctggcgcgatgacgccgagctgttcacccgctccggcgaggcatcgcaggatgtc
tatctggcatggcgggcggacagcgatgacgctttaccgcggccctatgccggtgagggg
gaatttggctgggagaaaagccgcctgtcagtgcgccagcgctggtggcagcagcacgaa
aaacagtggccgaccttacagggcgacgcgctggagcgctttcggcagcaactgcaccgc
ccaggcgctgaagtgctgttgctggcgccgggtgaagcggcagattactaccatgcagat
atgggactagttgcacggtag

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