Dickeya fangzhongdai ND14b: LH89_10765
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Entry
LH89_10765 CDS
T03347
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
ced
Dickeya fangzhongdai ND14b
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ced03019
]
LH89_10765
03009 Ribosome biogenesis [BR:
ced03009
]
LH89_10765
Messenger RNA biogenesis [BR:
ced03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LH89_10765
Ribosome biogenesis [BR:
ced03009
]
Prokaryotic type
rRNA processing factors
LH89_10765
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
HARE-HTH
DUF8260
DnaJ_CXXCXGXG
YqaJ
Motif
Other DBs
NCBI-ProteinID:
AIR69668
UniProt:
A0A2K8QH14
LinkDB
All DBs
Position
complement(2455966..2457435)
Genome browser
AA seq
489 aa
AA seq
DB search
MTAELLVNITPSETRVAYIDGGILQEIHIEREARRGIVGNIYKGRVSRVLPGMQAAFVDI
GLDKAAFLHASDIMPHTECVAGDEQKNFHVRDIAELVRQGQDLMVQVVKDPLGTKGARLT
TDITLPSRYLVFMPGASHVGVSQRIESEAERERLKKTVADYCDEQGGFIIRTAAEGVGEE
ELAQDAAFLKRLWTKVMERKKRNQTKCKLYGELALAHRILRDFAGASLDRIRVDSKLTYD
SLLEFTAEYIPEMTSKLEHYSGKQPIFDLYDVENEIQRALDRKVELKSGGYLIIDQTEAM
TTIDINTGAFVGHRNLDETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMGNEDHRRRV
LHSLEQALSKDRVKTGISGFSQLGLVEMTRKRTRESIEHVLCSECPTCHGRGSVKTVETV
CYEIMREIVRVHHAYDSDRFLVYASPAVGEALKSDESHALAEVEIFVGKQVKVQIEPLYS
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgagttgctggtaaacattaccccttcagaaacgcgtgtcgcttatatcgac
ggcggtattttgcaggaaatccatatcgagcgggaagcccggcgtgggattgtcggcaat
atctacaaaggccgggtcagccgtgtgttgccgggcatgcaggcggcattcgtcgatatc
gggctggataaagcagcgtttctgcacgcatccgatatcatgccgcataccgagtgcgtg
gctggcgacgagcagaaaaatttccatgtgcgcgacatcgccgaactggtgcgtcagggg
caggacctgatggtccaggtggtgaaagacccgctcggcaccaagggcgcgcgcctgact
accgatatcacgctgccgtcgcgttatctggtgttcatgccgggcgcgtcgcacgtcggg
gtatcccagcgtattgaaagcgaagccgagcgcgagcgcctgaaaaagacggtggccgat
tactgcgacgagcagggcggctttatcatccgtaccgccgccgagggcgtgggcgaagaa
gagctggcgcaagatgccgcctttctcaagcgcttgtggaccaaggtgatggagcgcaaa
aagcgcaaccagaccaaatgcaaactgtatggcgagctggcgctggcccatcgcatcctg
cgtgatttcgccggcgcgtcgctggatcgcatccgtgttgattcaaagctgacctacgac
tcgctgctggaattcaccgccgaatacatcccggaaatgaccagcaagctggagcattac
agcggcaaacagccgattttcgacctgtacgacgtggaaaacgagattcagcgggcgctg
gatcgcaaggtagaactgaaatccggcggctacctgattatcgaccagacggaagcgatg
accaccatcgatatcaataccggcgcgtttgtcggtcaccgcaatctggacgaaaccatt
ttcaataccaatatcgaagcgacgcaggcgattgcccgtcagctgcggctgcgtaatctg
ggcgggatcatcatcatcgattttatcgacatggggaatgaggatcaccgccgtcgcgtg
ctgcattcgctggagcaggcgctcagcaaggatcgggtcaaaaccggtatcagcggcttc
tctcaattgggactggtggagatgacgcgcaagcgcacccgtgagagcatagaacatgtg
ttgtgcagcgagtgtcctacctgtcacggccgcgggtcggtaaaaaccgtggaaaccgtg
tgctatgaaatcatgcgcgaaatcgtgcgtgtgcaccatgcttatgattccgaccgcttc
ctggtttacgcctcgccggcggtgggcgaagcattgaaaagcgacgagtcgcatgcgctg
gcggaagtggagattttcgtcggcaagcaggtcaaggttcagatcgaacccctgtacagc
caggaacagtttgatgtggtcatgatgtaa
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