Dickeya fangzhongdai ND14b: LH89_11610
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Entry
LH89_11610 CDS
T03347
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LH89_11610
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ced02000
]
LH89_11610
Transporters [BR:
ced02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LH89_11610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AIR69817
LinkDB
All DBs
Position
complement(2626286..2627881)
Genome browser
AA seq
531 aa
AA seq
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MVTRRRFLAGCATVPFLSWLNLNTAFADTPPSMLVMAMQLDNMTSLDPQEGFEAVGTEII
GNLYQRLVMPNPANPQEVIGDLAVSWEVGNDSKTFTFHLNPKAKFADGSPVTADDAAFSL
QRAVKLDKSPAFIINQFGFTKDNVEQHITAPDEKTLVISLDKPAAETFLLYCLSAPVGSI
VQKKAALANQQNNDLGNQWLKQNSAGSGPFSLVSWKASESIILQKNDHFPSDNAFKRVLL
KHIVDPSAQLLMLQKGDVDIARNLTTEQIRPLVNDSNYHLVRQSIASVMLLSCNTANEFL
KKPQVWQAIKWALDYDSIQKNILPLTHKVHQSFLPGGFPAALDDTPFHLDVAKAKALLKD
AGYPDGFEITMDHYSAQPHPDIAQAIQTQLGAIGIKVKLIAAENRQVLTKMRARQQQLAL
TVWGADYFDPNSNAEAFCVNTDNSDGARNRTLAWRCGWSDEKFNQLTEQALHEQDPAKRI
ALYETLQRNHRELSPFTLMMQDEKTLACRKNLSGVTMTVLSKVPYQQVKKA
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggtcaccagaagacgttttcttgccggttgcgctaccgtgcctttcctgtcctggctc
aatctgaacaccgcgtttgccgatacgccgccgtccatgctggtgatggcgatgcagctt
gataacatgaccagtctcgacccgcaggaagggtttgaggcggtagggaccgaaatcatc
ggcaacctgtaccagcgtctggtgatgccaaacccggccaacccgcaagaggtgattggc
gatctggccgtcagttgggaggttggcaacgacagcaaaaccttcaccttccacctcaat
ccgaaagccaaattcgccgacggttcgccggttaccgccgacgatgccgccttctcgttg
cagcgcgcggtcaagttggacaagagcccggcgttcatcatcaaccagttcggttttacc
aaagacaacgtggagcagcacatcaccgcgccggatgaaaaaacgctggtgataagcctg
gataagccggcggcggaaaccttcctgctgtactgcctgtccgcgccggtgggcagcatc
gtgcagaaaaaggcggcgctggctaatcagcagaacaacgatctgggcaaccaatggctg
aaacagaacagcgccggctccggcccgttctcgttggtgagctggaaagccagcgaaagc
atcatcctgcagaagaacgatcacttcccaagcgacaacgcctttaagcgcgtcctgctc
aaacacatcgtcgacccgtccgcccagttgctgatgctgcagaaaggggacgtggatatc
gcccgcaacctgaccaccgagcagattcgcccgctggtgaacgacagtaactaccatctg
gtgcgccagagcatcgccagcgtgatgctgctgtcttgcaacaccgccaacgaattcctg
aaaaaaccacaggtgtggcaggccatcaagtgggcgctggattacgacagcatccagaaa
aacattctgccgctgacgcacaaggtgcatcagagcttcctgccgggcggttttccggcg
gcgctggacgacaccccgttccatctggatgtcgccaaagccaaagcgttgctgaaagac
gccggttatccggacggctttgagattacgatggatcactactccgcccagccgcacccg
gatatcgcgcaggcgatccagacccagcttggcgctatcggtatcaaggtgaagctgatt
gcggcggaaaaccgtcaggtactgactaaaatgcgcgcccgccagcagcaactggcgctg
acggtgtggggcgcggactatttcgacccgaactccaacgccgaagccttctgcgtcaac
accgacaacagcgacggcgcccgcaatcgcacgctggcctggcgttgcggctggtcggat
gaaaagttcaaccagttgaccgaacaggcgctgcatgagcaggatccggccaaacgcatc
gcgctgtacgaaaccctgcaacgcaaccaccgcgaactgagcccgttcacgctgatgatg
caggatgagaaaacgctggcctgccgtaagaacctcagcggcgtgaccatgacggtattg
agcaaagtgccttaccagcaggtgaagaaagcctga
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