KEGG   Dickeya fangzhongdai ND14b: LH89_11980
Entry
LH89_11980        CDS       T03347                                 
Name
(GenBank) type VI secretion protein VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
ced  Dickeya fangzhongdai ND14b
Pathway
ced03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ced00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LH89_11980
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ced02044]
    LH89_11980
Secretion system [BR:ced02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LH89_11980
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484 Gp5_C Phage_Mu_Gp45
Other DBs
NCBI-ProteinID: AIR69887
LinkDB
Position
complement(2717644..2719497)
AA seq 617 aa
MANSTGLQFTVKIGALPESTFAVVDFELDEALNQPFALSLNLASSQPGIDFGAVLDQPCE
LLVWYEGELQRRVSGIVSRFAQGDTGFRRTRYQAEVRPALWRLGLRTNARIFQTQKPDTI
ISALLEEAGITDYAFALRHEHAVREYCVQYRESDLAFINRLAAEEGLFYFHEFDAGQHRV
VFADDAGALSKGPALFFNLATQGLSEGAYVRRFRYAEAVSTAEVALKDYSFKTPAYGLLH
NKMSSELDHQRGSYQHFDYPGRFKLDPSGKAFTGYRLDALRAGAMTGSGESNAAELMPGS
TFTLTEHPNPAFNLAWQVVAVTHSGQQPQALEEESGGEPTTLSNSFEVVKATTTWRAALP
YKPMVDGPQIATVVGPAGEEIYCDEFGRIKLQFPWDRYGASDDQSSCWVRVSQGWAGGQY
GLIAIPRIGHEVVVSFLEGDPDQPIVTGRTFHATNPSPYPLPANKTRTSLRTSTHKGAGF
NELRFEDQSGQEEVFIHAQKDMNTVVLNNRSTSVNASHSENVGGDQTVVVQHNQTVSVKE
NQVTEIQGEQTVAVTKNRNTTVDDNESLQVKNNIAIQSQSGDILIATAGGFIAIDKDGNI
AITGKGLVLNGTRIDLN
NT seq 1854 nt   +upstreamnt  +downstreamnt
gtggccaacagtacaggacttcagttcaccgtaaaaatcggcgcgctgccggagagtacc
ttcgcggtggtggattttgaactcgacgaggcgctgaaccagccgtttgcgctgtcgctc
aatctggcaagcagccagcccggcatcgacttcggcgcggtgctggaccagccgtgcgag
ctgctggtgtggtacgaaggcgaactgcagcgccgggtcagcggtatcgtcagccgcttt
gcccagggtgacaccggttttcgccgtacccgctatcaggccgaggtgcgcccggcactg
tggcggctcggtctgcgcaccaacgcccgcatcttccagactcagaagccggacaccatt
atcagtgccctgctggaggaagcgggcatcaccgattacgccttcgccctgcgccatgag
cacgcggtacgcgagtactgcgtgcagtaccgcgaaagcgacctggcgttcatcaaccgg
ctggcggcggaagaagggctgttctacttccacgagtttgacgccggccagcaccgggtg
gtgttcgccgacgacgccggtgcgctcagcaaaggcccggcgctgttcttcaacctggcc
acacaggggctgagcgaaggggcgtatgtgcggcgtttccgctacgccgaagcggtgagc
accgccgaggtggcgctgaaggactacagcttcaaaaccccggcctacgggctgctgcac
aacaagatgagcagtgagctggaccatcagcgcggatcctaccagcacttcgactacccc
ggccgcttcaagctggacccgagcggcaaggcgtttaccggctaccggctggacgcgctg
cgcgccggggcgatgaccggcagcggcgaatccaacgccgccgaactgatgccgggcagc
acctttaccctcaccgaacacccgaacccggcgttcaatctcgcctggcaggtggtggcg
gtgacccacagcgggcagcagccgcaggcgctggaagaggagagcggcggcgaaccgacc
acgctcagcaacagtttcgaggtggtgaaagccaccaccacctggcgggcggcattgccg
tacaagccgatggtggacggcccgcagattgccaccgtggtcggcccggcaggcgaagag
atttactgcgacgaatttggccggataaagctgcagttcccgtgggaccgctacggcgcc
agcgacgaccagagttcgtgctgggtgcgggtgagccagggctgggccggcggccagtac
gggctgattgccattccgcgcatcggtcatgaagtggtggtgagctttctggaaggcgac
ccggaccagcccatcgtcaccggtcgaacctttcacgccaccaacccgtcgccgtatccg
ctgccggcgaacaagacccgcacctcgctgcgtaccagtacccacaagggcgccgggttc
aacgaactgcgttttgaagaccagtccgggcaggaagaggtgtttatccacgcccagaag
gacatgaacaccgtggtgctgaacaaccgcagcacgtcggtcaacgccagccatagcgag
aacgtgggcggcgaccagacggtggtagtgcagcacaaccagacggtgtcggtgaaggaa
aatcaggtcaccgagattcagggcgagcagaccgtcgccgtcaccaaaaaccgcaacacc
accgttgacgacaacgagtcgctgcaggtgaaaaacaatatcgccatccagtcccagagc
ggcgacatcctgattgccaccgccggtggcttcatcgccattgataaggacggcaacatt
gccattaccggtaaaggactggtgctgaacggtacccgtatcgatttgaactaa

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