Dickeya fangzhongdai ND14b: LH89_12265
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Entry
LH89_12265 CDS
T03347
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
ced
Dickeya fangzhongdai ND14b
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ced03016
]
LH89_12265 (trmE)
Transfer RNA biogenesis [BR:
ced03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
LH89_12265 (trmE)
Prokaryotic type
Methyltransferases
LH89_12265 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
Ras
RsgA_GTPase
ABC_tran
GTP_EFTU
Roc
AAA_28
Arf
Gtr1_RagA
SRPRB
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AIR69941
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Position
2784066..2785430
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AA seq
454 aa
AA seq
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MSHTDTIVAQATPPGRGGVGILRISGRQASAVAQAVLGKLPKPRYADYLPFHDADGSVLD
QGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKLVVALPDVRIARPGEFSERAFLNDK
LDLAQAEAIADLIDASSEQAARSAVNSLQGVFSTRIHQLVEALTHLRIYVEAAIDFPDEE
IDFLSDGKIEAMLNDVIGDLGAVRAEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRD
AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDEVERIGIERAWQEIEQADRVL
FMVDGTTTDAVEPAAIWPEFMARLPKTLPITVVRNKADVTGEPLGIEDVNTYSLIRLSAR
TGNGVDLLRDHLKQSMGFTSNTEGGFLARRRHLQALEQAAQHLQQGHEQLVGAYAGELLA
EELRLAQQALSEITGEFTSDDLLGRIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagccataccgacaccatcgttgcccaagccaccccgccgggacgcggcggcgtaggt
attctgcgcatctccggccggcaagcctcagcagtcgcacaggcggtgctgggcaagctg
cccaaaccgcgttacgccgattatctgcctttccatgacgccgacggtagcgtgctcgat
caggggattgccctgtggtttcccggtccgaactcctttaccggcgaagacgtgctggag
ctacagggacacggcggcccagtgattctcgatctgctgctcaaactagtcgtggcgctg
cctgacgtgcgcatcgcccgtcccggcgagttctccgaacgggcgtttctgaatgacaaa
ctggatctggcgcaggccgaggcgattgccgacctgatcgacgccagttccgagcaggcg
gcccgttccgccgtcaactcgctgcagggcgtgttttccacccgcatccaccaattagtg
gaagcactcactcacctgcgaatctatgtggaagccgcgattgattttcccgatgaagaa
atcgacttcctctccgacggcaaaatcgaagccatgctcaacgacgtgatcggcgatctg
ggcgcggtacgcgccgaagcgcgtcagggcagcctgctgcgcgaaggcatgaaggtggta
atcgccggccggccgaatgccggtaaatccagcctgttgaatgcactggccgggcgcgac
gccgccatcgtcaccgatatcgccggcaccacccgcgatgtgctgcgcgagcatattcac
atcgacggcatgccgctgcatatcatcgacaccgccgggctgcgcgacgccagcgatgag
gtggaacgcatcggcatcgagcgagcctggcaggaaatcgaacaggcggaccgggtgttg
ttcatggtggacggcaccaccaccgatgcggtggaaccggcggctatctggccggaattt
atggcgagattaccgaaaacgttgcccattaccgtggtgcgcaacaaagcggatgtcacc
ggcgaaccgctgggcattgaagatgtgaatacttactcacttatccgcctctccgcccgc
accggcaatggcgtagacctgttgcgcgaccacctcaagcaaagcatggggtttaccagc
aacaccgaagggggctttctggcccgccgccgccacttacaggcactggagcaagcggcg
caacatctgcaacaagggcatgaacaactggtcggcgcctacgccggcgaactactggcc
gaagaactgcggctggctcagcaggcgttgagtgaaatcaccggcgaattcacctccgat
gacctgctgggaaggattttttccagtttttgtattgggaagtag
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