Dickeya fangzhongdai ND14b: LH89_12570
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Entry
LH89_12570 CDS
T03347
Name
(GenBank) pectate lyase
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced00040
Pentose and glucuronate interconversions
ced01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
LH89_12570
Enzymes [BR:
ced01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
LH89_12570
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pel9A-like_beta_helix
Motif
Other DBs
NCBI-ProteinID:
AIR69999
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Position
2850073..2852277
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AA seq
734 aa
AA seq
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MKYAASGLLSVALNSLLLLGSNTAFAATQDTAPVWHSIAFGQSTDVNFATNVLPDKVGVN
DVTINGKKLTVNDKVDLSAPITIESRGGKIANTHDGLTFFYTQLPANVNFTLQSDVTVDQ
FGPESDAKPNAQEGAGLLVRDILGVPRQEPLKEGYEEFPAASNMVMNAIMTQDKKSKTEV
KMQLISRDGVTQPWGNTNAQITRASYQEKINLEQTPTFRLKLERTDDGFITSYAPKGSDQ
WVSKTVKGADLVTHQDKNHYYVGFFASRNAKITISNASLTTSPANTKPSAPFKAEVNAPL
LQVASSPLSASDTYPVQARVNYNGTLEVFQNGKSLGKPQAIRAGDYFSLTAKLTQPKSDF
KLVYLPGEGEDKTAKETSFSVEKIKLADAKNLYVSPEGKADNNGSKNAPLDIKTAINALQ
AGGTLWLMDGDYSATVIPVSASGNANGIKTLMPAGKKAVFHGLQLNASYWKVKGVEITEK
SFRIEGSYNQIERVLAHHCDNTGIQVSSSDSVGRPLWASHNLILNSESHSNQDPSKKDAD
GFAVKMRVGEGNVIRGAFSHDNVDDGFDLFNKIEDGPNGVVVIENSISVNNTSNGFKLGG
EGQPVAHQVKNSIAIGNHMDGFSDNFNPGALQVSNNIALDNVRFNFIFRPSPYYGPEKQG
IFKNNVSLRTQPGKYDDAVVGRVDASNYFIKNNHALNSQGKEITTANYKSVVVPAVFSRD
EKGNLQLGDFLKKK
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacgctgcttcggggcttctctctgtcgccctaaattctcttttgcttctgggt
tccaataccgcctttgccgccactcaggataccgcgccagtctggcatagcatcgcgttc
ggccagtccacggatgtgaatttcgcgaccaacgtcctgccggacaaggtgggcgtcaac
gacgtcaccatcaacggcaaaaagctgacagtaaatgacaaggtcgacctctccgcgccg
atcactatcgaaagccggggaggaaaaatcgccaatacgcatgacggcttgaccttcttc
tacacgcagttgcccgccaacgtgaatttcacgctgcaatccgatgtgacggtcgatcag
ttcggcccggaaagcgacgccaaacccaacgctcaggaaggcgccggcctgctggtgcgc
gatattctcggcgtaccgcgtcaggagccgttgaaagagggatacgaagagtttccggcg
gcatcgaacatggtgatgaacgccatcatgacgcaggataaaaaatcgaaaaccgaagtg
aagatgcagctcatcagccgtgatggcgttacgcagccctggggtaataccaacgcacaa
atcacccgcgccagctatcaggaaaaaattaatctggaacaaacgccaacgttccgcctg
aaactggaacgcacggatgacggcttcatcacctcttatgcgcccaagggcagcgaccag
tgggtcagcaagacggtaaaaggcgcggatttagtcactcatcaggacaagaatcactac
tatgtggggttcttcgcctcccgtaacgcgaagatcaccatcagcaatgccagtctgacc
accagcccggccaacaccaaaccttccgccccattcaaagcagaagtcaatgcgccgttg
ttgcaggtagcgtcctccccgctctccgccagcgacacttacccggtacaggcgcgggtc
aattacaacggcacccttgaagtgttccagaacggcaaatcgctcggcaaaccgcaagca
atacgcgccggcgattatttttcccttaccgcgaagctgacgcagcctaaatccgatttc
aaactggtttacctgccgggtgaaggcgaagacaaaacggcgaaagaaacctcgttcagc
gtggaaaaaatcaagctggccgatgccaaaaatctgtatgtttctccggaaggcaaagcc
gacaacaacggcagcaagaacgcgccgctggatatcaaaacggccatcaacgccctgcag
gccggcggcacgctatggctaatggacggcgattacagcgccaccgtgattccggtcagc
gccagcggcaacgccaacggcattaaaacgctgatgccggccggcaaaaaagcggtattc
cacgggctacagctcaacgccagctactggaaagtcaaaggcgttgaaatcacggaaaaa
agcttccgtattgagggcagctacaaccagattgaacgcgtactggcgcaccactgcgac
aacaccggtattcaggtttcctccagcgacagcgtgggccgtccgctgtgggccagccat
aacctgattctgaactcggaatcgcacagcaaccaggaccccagcaaaaaagacgcggac
ggcttcgccgtgaaaatgcgcgttggcgagggtaacgtgattcgcggcgcattctcccat
gacaatgttgatgacggcttcgacctgttcaacaaaattgaagacggcccgaacggggtt
gtggtgatcgagaattccatttcggtcaacaacaccagcaacggctttaaactggggggt
gaaggccagccagtggctcatcaggtgaagaatagcatcgctatcggcaaccacatggac
gggttcagcgacaacttcaatccgggcgcgttgcaagtctccaataacatcgcgctggat
aacgttcgcttcaactttatcttccgcccgagcccttactatggcccggaaaaacaaggg
attttcaaaaacaacgtttcgctgcgtactcaacccggcaaatatgacgatgccgtggtg
ggccgagtggatgccagcaactacttcatcaagaataaccatgcgctcaacagccagggc
aaggagatcaccacggcgaattacaaatccgtcgtggtgccggcggtcttcagtcgcgat
gaaaaaggcaatctgcaattgggtgattttctgaagaagaaataa
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