Dickeya fangzhongdai ND14b: LH89_15015
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Entry
LH89_15015 CDS
T03347
Name
(GenBank) GTPase RsgA
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced00730
Thiamine metabolism
ced01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LH89_15015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ced03009
]
LH89_15015
Enzymes [BR:
ced01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
LH89_15015
Ribosome biogenesis [BR:
ced03009
]
Prokaryotic type
GTPases
LH89_15015
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
FeoB_N
AAA_29
GTP_EFTU
cobW
AAA_16
ABC_tran
nSTAND1
AAA_22
Gp-FAR-1
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AIR70451
LinkDB
All DBs
Position
complement(3378949..3379998)
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AA seq
349 aa
AA seq
DB search
MSKKKLSKGQQRRVSANHQRRLKHADSKVEWDDSQLSEPQEGVIISRFGMHADVEAPNGE
LHRCNIRRTIHSLVTGDRVVWRAGNETLAGISGIVEAVHPRQSVLTRPDYYDGLKPIAAN
IDQIVIVSAILPELSLNIIDRYLVACETLEVEPLIVLNKIDLLDDEGRAFVEEVMDIYRA
LHYRVLMMSSHTQQGVAELEAALTGRVSIFAGQSGVGKSSLLNALLYPDDAQILVNDVSD
ASGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLDPEQVTRGFIEFREYLGGCKFRD
CKHDTDPGCAIRAALERGEIAPERFDNYHRILESMAQVKTRKSFSAPDN
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaaaagaaactgtcaaaaggtcagcaacggcgggtcagcgccaaccatcagcgc
cgcctgaaacatgccgacagcaaggtcgagtgggatgacagccaactgagcgaaccgcag
gaaggcgtcattatcagtcgtttcggcatgcacgccgatgtggaagcgccgaacggcgag
ctgcaccgctgcaacattcgccgtaccatccactcgctggtcaccggcgatcgggtggtc
tggcgcgccggcaacgaaacgctggccggcatcagcggcatcgtcgaggcggtgcatccg
cgccagtcggtgttgacccgcccggactactatgacggtctcaaacccattgccgccaac
atcgatcagattgtgattgtctccgccattctgccggagctgtcgctcaatattatcgat
cgttatctggtggcctgcgaaacgctggaagtcgagccgctgatcgtgctcaacaaaatc
gacctgctggatgacgaaggccgggcgtttgtggaagaggtgatggatatctatcgcgcg
ctgcactaccgggtgttgatgatgtccagccacacccagcagggcgtcgccgagctggaa
gccgcgctgaccggccgcgtcagcatctttgccgggcagtccggcgtcggtaaatcgagc
ctgctcaacgcactgctctaccctgatgacgcccaaattctggtcaacgacgtatccgac
gcttccggactgggccagcacaccaccaccgccgctcgtctgtaccatttcccgcacggc
ggcgatgtcatcgactcgccgggcgtgcgcgaattcgggctgtggcatctggatccggaa
caggtgacgcgcggttttatcgagttccgcgaatacctgggcggctgcaaattccgcgac
tgcaaacacgataccgaccctggctgcgccattcgcgccgcgctggagcgcggggagata
gcaccagagcgtttcgacaattatcaccgtatccttgagagcatggcgcaggtaaaaacg
cgtaaatccttttctgctccggataactga
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