Dickeya fangzhongdai ND14b: LH89_15020
Help
Entry
LH89_15020 CDS
T03347
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LH89_15020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ced03019
]
LH89_15020
03009 Ribosome biogenesis [BR:
ced03009
]
LH89_15020
Messenger RNA biogenesis [BR:
ced03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LH89_15020
Ribosome biogenesis [BR:
ced03009
]
Eukaryotic type
Pre-60S particles
RNases
LH89_15020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AIR70452
LinkDB
All DBs
Position
3380148..3380690
Genome browser
AA seq
180 aa
AA seq
DB search
MVNENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNVLAEGPTLAVHQPDSQLALMDDW
NVRTHTASGLVDRVKASAFDEGAAERETIAFLQQWVPAGKSPICGNSIGQDRRFLFRYMP
ELEAYFHYRYLDVSTLKELARRWKPEMLAGFKKRNTHQALDDIRESVAELAYYREHFIQL
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatgaaaacaacctgatctggatcgatttggaaatgacggggctggatcctgag
cgggaccggatcatcgagatcgcaacactggtgaccgatgccaacctgaacgtactggcg
gaaggcccgacgctggcggtgcatcagccggacagccaactggcgctgatggatgactgg
aacgtgcgcacccacaccgccagcggtctggtggatcgggtcaaagccagcgcctttgac
gaaggcgccgcggaacgggaaaccatcgcattcctgcagcagtgggtgccggcgggtaaa
tcgccgatttgcggcaacagtatcgggcaggatcgccgctttctgttccgttacatgccg
gaactggaagcttacttccactatcgttatctggacgtcagcacgctcaaagaactggcg
cgtcgctggaagccggaaatgctggccggattcaaaaagcgcaatacccatcaggcgctg
gacgatatccgcgaatcggtagcggaactggcttactaccgcgagcactttatccagctg
taa
DBGET
integrated database retrieval system
