Dickeya fangzhongdai ND14b: LH89_15285
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Entry
LH89_15285 CDS
T03347
Name
(GenBank) ATPase AAA
KO
K02584
Nif-specific regulatory protein
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LH89_15285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ced03000
]
LH89_15285
Transcription factors [BR:
ced03000
]
Prokaryotic type
Helix-turn-helix
Other families
LH89_15285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF_2
AAA_5
GAF_3
AAA
AAA_2
Mg_chelatase
AAA_3
AAA_16
HTH_23
bpMoxR
TIP49
Motif
Other DBs
NCBI-ProteinID:
AIR70496
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Position
3433848..3435419
Genome browser
AA seq
523 aa
AA seq
DB search
MTQAPDTGNVVWRFDLSQQFTAVQRISAALSRATDIGQALQAVLRVLHDDAFMQHGMICL
YDPQRGGLRVEALYCEDQRVLSSSSQVCYRPGEGLVGTVMTQRQPLTLPRVADDQRFLDR
LNLYDYELPFIGVPLLGIEQQPIGVLAAQPMARYEERLPASTRFLETVASLIVQTVRLMR
APRRDGESPSAASRPAACKTPRPFGFDNMVGKSAAMRQTMEIIRQVSRWDTTVLVRGESG
TGKELVANAIHYNSPRAAAPFVKFNCAALPDNLLESELFGHEKGAFTGAVRQRKGRFELA
DGGTLFLDEIGESSASFQAKLLRILQEGEMERVGGDETLRVNVRIIAATNRHLEEEVRAG
HFREDLYYRLNVMPVSLPPLRERQEDIVELAQFLVKKIAAHQGRALRISDGAIRLLMGYS
WPGNVRELENCLERAAVMTDTGLIDRDVILFNHHDAAPMMNKPTPPAAAEEGWLDQNLDE
RQRLIAALEKTGWVQAKAARLLGMTPRQVAYRIQIMDINMHRL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgacacaggcacccgatacggggaacgtcgtatggcgttttgatttgtctcagcagttt
acggcggtgcagcgcattagcgcggcgctgagccgggccaccgacatcgggcaggcgtta
caggcggtgttgcgggtgctgcatgatgatgccttcatgcagcacggcatgatttgcctg
tatgacccgcagcgcggcgggctgagagtggaagcgctgtactgcgaggatcagcgggtc
ctgtccagcagcagccaggtgtgttaccggccgggcgaaggtctggtgggtacggtgatg
acccagcgtcagccgctgacgctgccgcgcgtggcggacgatcagcgttttctcgaccgg
cttaatctgtatgactacgagctgccgtttatcggcgtgccgttgttgggtatcgaacaa
cagccgatcggcgtgctggcggcccagccgatggcgcgttacgaggaacgcctgccggcc
agcacccgttttctggaaacggtggccagcctgatcgtgcagacggtgcggctgatgcgc
gccccccggcgcgacggcgaatcaccgtcggcggcgagccgcccggccgcctgtaaaacg
ccgcggccgttcggttttgacaacatggtggggaaaagcgcggcgatgcgccagacgatg
gagatcatccgtcaggtgtcgcgctgggacaccacggtgttggtgcgcggcgagagcggc
accggtaaagagctggtggcgaacgccatccactacaattcgccgcgcgcggcggcgccg
ttcgtgaaattcaactgtgcggcgctgccggataacctgctggaaagcgaactgttcggc
catgaaaaaggcgccttcaccggcgcggtgcgtcagcgtaaggggcgctttgaactggcg
gacggcggcacgctgtttctggatgaaatcggcgagagcagcgcctcgtttcaggccaag
ctgctgcgtatcctgcaggaaggggagatggagcgggtgggcggcgacgaaaccctgcgc
gtcaatgtgcggattatcgccgccaccaaccgccatctggaggaggaggtgcgcgccggt
catttccgcgaagatctctactaccggctgaacgtgatgccggtgtcgttgccgccgctg
cgggaacggcaggaggatatcgtcgagctggcgcagtttctggtgaagaagatcgccgcg
catcagggccgggcgctgcgcatcagcgacggcgccatccgcctgctgatggggtacagc
tggccgggcaatgtgcgcgagctggaaaattgtctggaacgggcggcggtgatgaccgac
accgggttgatcgaccgcgacgttatcctgtttaaccaccacgacgcggcgccgatgatg
aacaaaccgacgccgccggccgccgccgaagagggctggctcgatcaaaatctggatgaa
cgccagcggctgatcgccgcgctggagaaaaccggctgggtccaggccaaggcggcgcgg
ctactggggatgacgccgcggcaggtggcctatcgcatccagattatggacatcaatatg
caccgtttgtaa
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